G509160


Basic Information

Item Value
gene id G509160
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 42567105 ~ 42570169 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU577938
ATTCACGTTAAAATGACCCAGCGTGACAGCGGAATTATCTGAATTAGATCAGATAGTTAGTGAGGACTTGCTCAGAGCAACAGTTGGTCGCAATGTGCTCCAtaacccccccctcctcctcctttggccCAACCCATTGATGTCTGCGGATCTGAAGGCTTTGGAAAGGTATAAGCAGTGTAGTGGTGGAGGGTCCACCCTACAGATCTGCAGACATCCAAGGGTCAGGTTCACATACTGGTTAGGACCAAGAGCATAGTGATAGGGAGCAAATTGGGACCAGCTGCAAGACAAGAGAGTTGGGCAAATAGAGGAGTAAGTACAAGAGCAGATAATCACCAGACAAATACCAAGTCACTGTGTTGATACTTAAATCAACAGAAGAGTCGTGTACGTGTCAGTGCTGCACACAACATGCATCCTGAGATCACACAGCAGCATAGGTTAATAAGTGCTTAAAGTGGTTTAATGCTAGAACAGAATGCCATCCCAGTTGAAACAAAACGTACTCCCCATTTCACGTAAACAAAGCACAGGATTCAAAAAGAATACTGCAACAGAAATGCTCTTGTATGTAATAATGATTTGCATGACAGTAGCCCCGAGGGCGAGGCTAGTCGGTTTAACAGAATGAGAGACTATATTGCATTGGTTGTTGGTACCGGACAGTACTGTATGAACACACAGTGAACAATCCCAACTGCTAAAATGACTCACACACACCAAGAAGACCCCTTAAGCACTGATCAAATGTAAATCGTTAaagaatggcgccggaggggatgacTGCCGTTTTACATGCTCTTcaacaattgtgctattttgtgtgttttttcgcattgtttgtaacttattttgtacataatgttgatgcTAGCGTGTCTtgtgaaaagagcttctggataagaacagcgattactcacctcaaactggactaATATGTTTTCTTTATTGAGTCTGATGCAAAGGATATAAAGTTGCTCTCAGACAAAAGCCAAAATCCCTGTCGTTCGCATgaagaaaataaagaaatacaagGGGCGGAGATCAGGGTACCTTGTGAGAATTTGTAGGTGAGTGGATAACCCGGCTCTACCATCCATTCTATTGGCCAACATGAAATCACTGGAGAGTAAACTGtatgagctccgttcgagactatcctaccaacgtgACATTGAAAGAAgacacggataatatacagttggctgggttttccgtgcatcggcaggacagaacagctacatcCGTTAGacaaggggtgggggtgtgtgagaatttgtcaataacagctgctGCGAGATGTCTAAtattgaggtattgctcgcctgagttagtgtggcctacagcttatcatgaggtactccaTCTACCAAGAaggttttcatctatatttttcgtagccgtctatttaccaccacaaaccgacgctggcactaagaaaatgctcatccagaagcgacgctcctagtggccagggacttcaatgcaggcaaacttaaatccattttacctcatttctaccagcatgtcacatgagCAACCAAAAATGCTATACTACCTTTACCCCACATTCAGAGACGCGtataaagctctccctcgccaaccatttggcaaatctgaccttaattctatcctcctgattcctgcttacaagcaacaactaaagcaggaagtaccagtgactcgcccaatacggaagtggtcagatgatgcggatgctacgctacaggactcttttgctagcacagactggaatatgttctgggaggATGttctgttacatcctcagaaagcatgagctcctgagttgggaaaatcttgtgcaatacaccgacgcatgtcttgtattcaagatcctaaatggcctggctccccctccactcagtatttttgttcaacagaaaacccaaacatatggcagcagatccacaaggtctgccttgagaggtgactgtatagttcccttaaggaaaagcacctttagtaaatccgctttctctgtgagagcttcccatgtctggaatacactgccttcagacacacaactgcaccaccttatcacactttcacaaaaatgtatgaatacatggctaaaggtcaatctgATTTGTGATCATAATCCATAGCTGTGTATTGCCGTTTTccgtgttgtctgtagcttgtgaggtgtggaaacacttttatgaattttgtcttatgttgctctgtctgtatgctacgtcttgcttgtcctatgttgctctgcgtgtgctcactgctcaatgattgtctatattg
>TU577937
CTGCGGATCTGAAGGCTTTGGAAAGGTATAAGCAGTGTAGTGGTGGAGGGTCCACCCTACAGATCTGCAGACATCCAAGGGTCAGGTTCACATACTGGTTAGGACCAAGAGCATAGTGATAGGGAGCAAATTGGGACCAGCTGCAAGACAAGAGAGTTGGGCAAATAGAGGAGTAAGTACAAGAGCAGATAATCACCAGACAAATACCAAGTCACTGTGTTGATACTTAAATCAACAGAAGAGTCGTGTACGTGTCAGTGCTGCACACAACATGCATCCTGAGATCACACAGCAGCATAGGTTAATAAGTGCTTAAAGTGGTTTAATGCTAGAACAGAATGCCATCCCAGTTGAAACAAAACGTACTCCCCATTTCACGTAAACAAAGCACAGGATTCAAAAAGAATACTGCAACAGAAATGCTCTTGTATGTAATAATGATTTGCATGACAGTAGCCCCGAGGGCGAGGCTAGTCGGTTTAACAGAATGAGAGACTATATTGCATTGGTTGTTGGTACCGGACAGTACTGTATGAACACACAGTGAACAATCCCAACTGCTAAAATGACTCACACACACCAAGAAGACCCCTTAAGCACTGATCAAATGTAAATCGTTAaagaatggcgccggaggggatgacTGCCGTTTTACATGCTCTTcaacaattgtgctattttgtgtgttttttcgcattgtttgtaacttattttgtacataatgttgatgcTAGCGTGTCTtgtgaaaagagcttctggataagaacagcgattactcacctcaaactggactaATATGTTTTCTTTATTGAGTCTGATGCAAAGGATATAAAGTTGCTCTCAGACAAAAGCCAAAATCCCTGTCGTTCGCATgaagaaaataaagaaatacaagGGGCGGAGATCAGGGTACCTTGTGAGAATTTGTAGGTGAGTGGATAACCCGGCTCTACCATCCATTCTATTGGCCAACATGAAATCACTGGAGAGTAAACTGtatgagctccgttcgagactatcctaccaacgtgACATTGAAAGAAgacacggataatatacagttggctgggttttccgtgcatcggcaggacagaacagctacatcCGTTAGacaaggggtgggggtgtgtgagaatttgtcaataacagctgctGCGAGATGTCTAAtattgaggtattgctcgcctgagttagtgtggcctacagcttatcatgaggtactccaTCTACCAAGAaggttttcatctatatttttcgtagccgtctatttaccaccacaaaccgacgctggcactaagaaaatgctcatccagaagcgacgctcctagtggccagggacttcaatgcaggcaaacttaaatccattttacctcatttctaccagcatgtcacatgagCAACCAAAAATGCTATACTACCTTTACCCCACATTCAGAGACGCGtataaagctctccctcgccaaccatttggcaaatctgaccttaattctatcctcctgattcctgcttacaagcaacaactaaagcaggaagtaccagtgactcgcccaatacggaagtggtcagatgatgcggatgctacgctacaggactcttttgctagcacagactggaatatgttctgggaggATGttctgttacatcctcagaaagcatgagctcctgagttgggaaaatcttgtgcaatacaccgacgcatgtcttgtattcaagatcctaaatggcctggctccccctccactcagtatttttgttcaacagaaaacccaaacatatggcagcagatccacaaggtctgccttgagaggtgactgtatagttcccttaaggaaaagcacctttagtaaatccgctttctctgtgagagcttcccatgtctggaatacactgccttcagacacacaactgcaccaccttatcacactttcacaaaaatgtatgaatacatggctaaaggtcaatctgATTTGTGATCATAATCCATAGCTGTGTATTGCCGTTTTccgtgttgtctgtagcttgtgaggtgtggaaacacttttatgaattttgtcttatgttgctctgtctgtatgctacgtcttgcttgtcctatgttgctctgcgtgtgctcactgctcaatgattgtctatattgtaattgtttttaataacctgcccagggactgcagttgaaatctgccacgctgatccttaacatgGGGGCACCTTAgggctgtgtgcttagtcccctcatgtactcccaGTTCATCCACGTCTGCGTGGCcaaacaactccaacaccatcattaagtttgctgacgacacagcggcggtaggcctgatcaccgacaacgatgagacagcctatagggaggaggacaagagacctggcagtgttgtgccaggataacaacctctccctcaacgtgagcaagacaaaggagatgattgtggactacaggaaaaggaggaccgagcacacccccattcacatcaactggGCTGTAGCGGAGTGGGTTAagagttaagttccttggtgtccacatcactaacaaactaacacggtccgaacacaccaagaaagttgtgaagaggacaTGACAATGCCTTtttcaccctcaggagactgaaaagatttggcatgggtcctcagatcctcaaaggttTCACAGCTTCACCATCGAGAGcctcctgaccggttgcatccccacctggtatggcaactgctcggcatctaatcgtaaggcactacagagagtagtgcgtacaacccagtacattactggtgccaagcttcctaccatccaggacctattaCACTAGgcagtgtcacaggaaggcccaacaaattgtcaaagactccagtcacccaagtcattgactgttctctctgcaaccgcacggcaagtggtaccggagcaccaagtctaggtccaaaagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU577938 False 2280 TUCP 0.44 1 42567105 42569384
TU577937 True 2922 TUCP 0.46 1 42567248 42570169

Neighbor

gene id symbol gene type direction distance location
stxbp1b LOC106585214 coding upstream 151997 42372531 ~ 42415108 (+)
LOC110525988 LOC106584966 coding upstream 317839 42244505 ~ 42249266 (+)
paxx ci142 coding upstream 423497 42137053 ~ 42143608 (+)
htr1aa LOC106585208 coding upstream 793150 41771717 ~ 41773955 (+)
LOC118964870 NA coding upstream 809902 41754679 ~ 41757203 (+)
camsap1b LOC106585218 coding downstream 33139 42603308 ~ 42645904 (+)
LOC110525996 LOC106585219 coding downstream 75865 42646034 ~ 42655499 (+)
LOC118964872 NA coding downstream 209092 42779261 ~ 42780791 (+)
LOC110525999 LOC106585222 coding downstream 240145 42810314 ~ 42825158 (+)
LOC118965026 LOC106585222 coding downstream 259642 42829811 ~ 42836106 (+)
G509148 NA non-coding upstream 17879 42548231 ~ 42549226 (+)
G509080 NA non-coding upstream 121668 42445230 ~ 42445437 (+)
G509078 NA non-coding upstream 123782 42443114 ~ 42443323 (+)
G509077 NA non-coding upstream 124521 42442366 ~ 42442584 (+)
G509070 NA non-coding upstream 130659 42436214 ~ 42436446 (+)
G509161 NA non-coding downstream 390 42570559 ~ 42573399 (+)
G509163 NA non-coding downstream 6384 42576553 ~ 42576898 (+)
G509164 NA non-coding downstream 8050 42578219 ~ 42588368 (+)
G509252 NA non-coding downstream 159751 42729920 ~ 42730149 (+)
G508559 dph7 other upstream 435165 42129225 ~ 42131940 (+)
G507768 LOC105030512 other upstream 1095697 41469551 ~ 41471408 (+)
fbxl17 fbxl17 other upstream 1707583 40568637 ~ 40886427 (+)
G506285 NA other upstream 2000676 40566067 ~ 40566429 (+)
G506281 LOC106585187 other upstream 2019592 40544863 ~ 40547513 (+)
G510416 NA other downstream 1087299 43657468 ~ 43658493 (+)
G512192 LOC106584908 other downstream 2614270 45184439 ~ 45185869 (+)
LOC110526028 ccdc60 other downstream 2647558 45187119 ~ 45236944 (+)
G512912 NA other downstream 3065420 45635589 ~ 45636250 (+)
LOC110526042 LOC106584891 other downstream 3616831 46076084 ~ 46190292 (+)

Expression


Co-expression Network