G512192 (LOC106584908)


Basic Information

Item Value
gene id G512192
gene name LOC106584908
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 45184439 ~ 45185869 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU581131
GTGTATCTCCTGGTAAAGCATCTAGCAATAAAGCCATGCTTGTCTGGTCTCTCCTCGTGTTACCTCCGATTTCCAGGAAGCCTTCCCGGGTCCTGAGAGTGATCTCTACAGGGGAGAAGTGACTGACGTCCAGGGTGATCCTCCACTTGTACCCCTCCTCCTGGACCTCTGACAGCCCTTGCAACCCTGCAGACTCTGCCCTGCTCAGCCTGGGGCCTGGCTGGTGCATGGAGGAGGCCGGGACCAGGAAGGAGGGCaccaagagggggagagagggcatGTACCCAGGCCAGGAGCTGGCCGCCAGGCGTCTATGGATGTTATCTATCCAGCTAAATTCACGGAGGTCTCCAGCCTCTAGGAATGGTGGCAGGCCAAAATCCTGGTTGGGGAGGAGGCAACTGGGGCTCGGGGACTGCCACCAGCTCCGGAGGGCAGACCAGAATAAGTCCCGGGAGTTGTGGGGACGTGATGGTGCCGATGGGGCCGCTGTGTACGCTTTGGTCTGCTCGGTCATGATTCAGAAAAAATATTAGAGGAGCAAATAAGAAATGCAGAAGTCGTCTTTAATGAGGAAGAGTCGCAGGAGGATGAATTCTTATAACAAAGGAGAGGAGGGCTTTCAGAAGAGAAGAAGCACTGTGCAGTGAAGACCGAGAAGTCTCTAGGGCTCTTTATATACCCTCACTGTCTGTTTTAGCACTTATTAAGCACTAATGGTTATCCTATGAGAGGGGAATGTGAGGGTGAGGTGATGGGTGCGCCTCAGAGTCAGGGCCAGGGAGAAGGGGTCATAcactctggcaccctattccctttatagtgcactactttagggcGCTAGTcaaaagggctctggtcaaaagtagtgcac

Function

NR:

description
uncharacterized protein LOC110526026

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU581131 True 874 TUCP 0.54 2 45184439 45185869

Neighbor

gene id symbol gene type direction distance location
LOC110526027 hspb8 coding upstream 5614 45155981 ~ 45178825 (+)
LOC110526025 srrm4 coding upstream 31454 45061658 ~ 45152985 (+)
LOC110526024 suds3 coding upstream 288457 44873385 ~ 44895982 (+)
LOC110526020 NA coding upstream 443867 44730067 ~ 44740687 (+)
LOC110526013 LOC106585235 coding upstream 835652 44345482 ~ 44348787 (+)
LOC110526028 ccdc60 coding downstream 1250 45187119 ~ 45236944 (+)
si:dkey-174n20.1 LOC106584900 coding downstream 461865 45647734 ~ 45654067 (+)
LOC110526036 LOC106584896 coding downstream 627529 45813398 ~ 45837739 (+)
LOC110526902 NA coding downstream 686950 45872819 ~ 45873709 (+)
LOC118964875 NA coding downstream 714050 45899919 ~ 45901120 (+)
G512188 NA non-coding upstream 126404 45057711 ~ 45058035 (+)
G511781 NA non-coding upstream 138519 45020247 ~ 45045920 (+)
G511647 NA non-coding upstream 434391 44749641 ~ 44750048 (+)
G511577 NA non-coding upstream 528871 44655225 ~ 44655568 (+)
G512277 NA non-coding downstream 21390 45207259 ~ 45207720 (+)
G512284 NA non-coding downstream 26913 45212782 ~ 45213075 (+)
G512295 NA non-coding downstream 44041 45229910 ~ 45230320 (+)
G512297 NA non-coding downstream 47185 45233054 ~ 45233283 (+)
G510416 NA other upstream 1525946 43657468 ~ 43658493 (+)
G509160 NA other upstream 2614270 42567105 ~ 42570169 (+)
G508559 dph7 other upstream 3052499 42129225 ~ 42131940 (+)
G507768 LOC105030512 other upstream 3713031 41469551 ~ 41471408 (+)
fbxl17 fbxl17 other upstream 4324917 40568637 ~ 40886427 (+)
G512912 NA other downstream 449720 45635589 ~ 45636250 (+)
LOC110526042 LOC106584891 other downstream 1001131 46076084 ~ 46190292 (+)
G513501 NA other downstream 1174087 46359956 ~ 46360585 (+)
G513745 NA other downstream 1714692 46900561 ~ 46901123 (+)

Expression


Co-expression Network