G513033


Basic Information

Item Value
gene id G513033
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 45851233 ~ 45863183 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU582053
GTTTTtataaaaatgagttttaattcCATTTCAGTATAAAACATTTCTGAAGCCCTGCCAAATCAAATTCAACTGTCACAATCTGACAAAGGTATGATTATTTCCTCTGTCCTGCCCAACAATCTAAAATGGCAGACAAATTAGGGCTGAGCGATCAAATTAATTTAAGCGATATTCCAAATGCCTATATCGCAAGAATCAATGTTTGTATTTCTCATGAGTGTTATGGTCTGTTTGTTCTCATGTCTTTTGGTCTCGACTTAGTCACTCCTTCCCACTAACACCAGAGAACTGTATATAAATGACTAGATGAACGTCTCCACCCAAAAAATGGGAGatgtcccaaaggcgggaaggcaggtAACAAGCTTAAACTCAAACCATTGGGCTcattttggacagatctgacaaCAAAAAGTCGCTATTTACAATTAAAGTTTGGTCCatcaaaaaaataaatcatatgGACACTTTAGAGACGTTAACAATACCCTTTGTCTGAACTACTGAAATTGCAAACAGAGCAGACTAACAAAAATATATGCTCAGTTGCAGCATTGCACTACCAAGTACAGCGAGCAGCATTTTAGCAAAGACATATAGTAGTGGTCTAGTCTTAAATCTGCAATAAGGATAAAATAATGATTGGCAATGTCTCGTTCTGATTAAGTAGGCCACTTAATTTCAATCTTAACAAAGTACAGGATAGCATGCTGTTTCAACAGTTgagacagaagggtgtgttcataactcCACTGTTCtgccttgttagctagcaaatagagCCAAGTTTGCAaaacttgaaatataaagattagctggctaccTACTAGCACGTGGGCTTGTGCTTGAAACTGGTTAATTTTCAATGCCTGCTACAATAAGTTAATTATTAGTGAATGTTATTATGTATGCTTCTGGTTAAATTTGTAAGGAAAGGGAATTTCCATAAACTTGAAAGCTTGATCAGTGATGGCAAAAAGCATGTTAAACTACTTTGATAAAATAGTGtgttgtggaaggcttatatttagcctaggtataatTTCACACGCCATGGATTAGATTGTTGCTagacttttttttaaatgcagtgtatgaCTTAATTGTacaataacttttttttaaattacatttagGAAACAcccatacgtttttttttttttaacataacaGATTTTTAGACCATAATCGCCCAGCCCTAATACAAATGTGTTTGTCTTAAGAGTGCTCTCATTATGGGAAATATTACAATAATGAAAAAAAACAACCTTAATCACTCATCGTTAGCTATAATATTAATAAAATATCAAATGTGAAGTTCTGGTCAGTCAAATCAGTCTGAATACAAGTGTCTCCGAACACAGTCCAGTCAGAATACAAGCCTTCACAGTCAACAAGATGGTCTGTCTATGCAGTCTTCTGCTGTCCCTTCTTCCCGATCAAGGACTTATGGATGTGAGGGATCACACCCAGTCCAGCTCTCTGGGAGCGCGACACCGCTTTCGCCTTAGCTTTGCCACTGTCTTTCCCTGCCTTACCACCAGCCATTTCGTTATTTTGTTGTGGAACTGAGGAGATCGGAAACAATTTCGGTTCAAGACCGAGAGAAAAAATAAAGCCCTTAACAATACTATACCCGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU582053 True 1643 lncRNA 0.37 3 45851233 45863183

Neighbor

gene id symbol gene type direction distance location
LOC110526036 LOC106584896 coding upstream 13494 45813398 ~ 45837739 (+)
si:dkey-174n20.1 LOC106584900 coding upstream 197166 45647734 ~ 45654067 (+)
LOC110526028 ccdc60 coding upstream 614289 45187119 ~ 45236944 (+)
LOC110526027 hspb8 coding upstream 672408 45155981 ~ 45178825 (+)
LOC110526025 srrm4 coding upstream 698248 45061658 ~ 45152985 (+)
LOC110526902 NA coding downstream 9636 45872819 ~ 45873709 (+)
LOC118964875 NA coding downstream 36736 45899919 ~ 45901120 (+)
LOC110525032 NA coding downstream 95247 45958430 ~ 45959299 (+)
LOC110526904 NA coding downstream 105281 45968464 ~ 45972013 (+)
LOC110526042 LOC106584891 coding downstream 212901 46076084 ~ 46190292 (+)
G513030 NA non-coding upstream 42994 45808015 ~ 45808239 (+)
G513024 NA non-coding upstream 53425 45797501 ~ 45797808 (+)
G513021 NA non-coding upstream 57448 45790666 ~ 45793785 (+)
G512988 NA non-coding upstream 106076 45744949 ~ 45745157 (+)
G512916 NA non-coding upstream 207876 45642804 ~ 45643357 (+)
G513043 LOC100136024 non-coding downstream 40910 45904093 ~ 45906563 (+)
G513363 NA non-coding downstream 270015 46133198 ~ 46141623 (+)
G513377 NA non-coding downstream 330245 46193428 ~ 46193656 (+)
G513379 NA non-coding downstream 332055 46195238 ~ 46195439 (+)
G512912 NA other upstream 214983 45635589 ~ 45636250 (+)
G512192 LOC106584908 other upstream 665364 45184439 ~ 45185869 (+)
G510416 NA other upstream 2192740 43657468 ~ 43658493 (+)
G509160 NA other upstream 3281064 42567105 ~ 42570169 (+)
G513501 NA other downstream 496773 46359956 ~ 46360585 (+)
G513745 NA other downstream 1037378 46900561 ~ 46901123 (+)
G514464 NA other downstream 1063659 46926842 ~ 46927714 (+)
G514499 NA other downstream 1159111 47022294 ~ 47023092 (+)

Expression


Co-expression Network