G513502


Basic Information

Item Value
gene id G513502
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 46367652 ~ 46367855 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU582565
AGTTGATATATTTCACATCCAGGTATGAAGAAACCTGGATCAACTAGAATTGTTTCTCTAGGCTAGATTTTATTTGCTTTCCTCTCTCCTTGCAAAAAACTTCAATTTCTCTGAGAGCTACAACATGAGTTTCATTGGTTCATGGTTGTGCTCAGTCTAAATGTTGTTTAGTTGTCCGTAGGGATGCACGACATATCGGTATCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU582565 True 204 lncRNA 0.38 1 46367652 46367855

Neighbor

gene id symbol gene type direction distance location
LOC110526905 LOC106584888 coding upstream 104554 46199519 ~ 46263098 (+)
LOC110526042 LOC106584891 coding upstream 177360 46076084 ~ 46190292 (+)
LOC110526904 NA coding upstream 395639 45968464 ~ 45972013 (+)
LOC110525032 NA coding upstream 408353 45958430 ~ 45959299 (+)
LOC118964875 NA coding upstream 466532 45899919 ~ 45901120 (+)
ascc2 ascc2 coding downstream 78101 46445956 ~ 46461957 (+)
LOC110526048 sec14l2 coding downstream 103629 46471484 ~ 46514756 (+)
LOC110526049 LOC106570833 coding downstream 174749 46542604 ~ 46567635 (+)
msh3 LOC106584876 coding downstream 207080 46574935 ~ 46708962 (+)
rasgrf2b rasgrf2 coding downstream 355105 46722960 ~ 46900004 (+)
G513427 NA non-coding upstream 100119 46263122 ~ 46267533 (+)
G513380 NA non-coding upstream 171644 46195776 ~ 46196008 (+)
G513379 NA non-coding upstream 172213 46195238 ~ 46195439 (+)
G513377 NA non-coding upstream 173996 46193428 ~ 46193656 (+)
G513523 NA non-coding downstream 123549 46491404 ~ 46516159 (+)
G513619 NA non-coding downstream 279113 46646968 ~ 46697374 (+)
G513746 NA non-coding downstream 533695 46901550 ~ 46903598 (+)
G513748 NA non-coding downstream 537834 46905689 ~ 46905904 (+)
G513749 NA non-coding downstream 538666 46906521 ~ 46906796 (+)
G513501 NA other upstream 7067 46359956 ~ 46360585 (+)
G512912 NA other upstream 731402 45635589 ~ 45636250 (+)
LOC110526028 ccdc60 other upstream 1146870 45187119 ~ 45236944 (+)
G512192 LOC106584908 other upstream 1181783 45184439 ~ 45185869 (+)
G513745 NA other downstream 532706 46900561 ~ 46901123 (+)
G514464 NA other downstream 558987 46926842 ~ 46927714 (+)
G514499 NA other downstream 654439 47022294 ~ 47023092 (+)
G514662 LOC106597055 other downstream 935328 47303183 ~ 47329244 (+)
G514665 NA other downstream 938583 47306438 ~ 47320050 (+)

Expression


Co-expression Network