G514460


Basic Information

Item Value
gene id G514460
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 46929398 ~ 46929786 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU583588
TCGAATCAACCCAATGTCCACTTGGTAACACtgacagggtctgaatcaaacccaatgtaCACCTGGCACCCTGACAGGGTCTGACTCAAACTCAATGTACACCTGGCACACTGTCAaggtctgaatcaaacccaatgttAAGGGGAGGGAAGATTGGTCAAGAGGGTAAATTATTATTGTTGTTTTCCTGCTTGATTCTTATGGAAAAACACTGTTTACAAAAGCTTTGTTAAAGAACAAGAAGACCCACACACTGTTTACAAAAGCTTTGTTAAAGAACAAGAAGACCCACACACTGTTTACAAAAGCTTTGTTAAAGAACAAGAAGACCCACACACTGTTTACAAAAGCTTTGTTAAAGAACAAGAAGACCCACACACTGTTTACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU583588 True 389 lncRNA 0.40 1 46929398 46929786

Neighbor

gene id symbol gene type direction distance location
rasgrf2b rasgrf2 coding upstream 29394 46722960 ~ 46900004 (+)
msh3 LOC106584876 coding upstream 220436 46574935 ~ 46708962 (+)
LOC110526049 LOC106570833 coding upstream 361763 46542604 ~ 46567635 (+)
LOC110526048 sec14l2 coding upstream 414642 46471484 ~ 46514756 (+)
ascc2 ascc2 coding upstream 467441 46445956 ~ 46461957 (+)
LOC118964876 NA coding downstream 1298 46931084 ~ 46935277 (+)
LOC110526054 NA coding downstream 27716 46935543 ~ 46978128 (+)
LOC110526907 NA coding downstream 63810 46993596 ~ 47004352 (+)
si:dkey-88e18.2 il12b coding downstream 181026 47110812 ~ 47119011 (+)
LOC110526052 hic2 coding downstream 221114 47150900 ~ 47217434 (+)
G514449 NA non-coding upstream 8844 46919624 ~ 46920554 (+)
G514440 NA non-coding upstream 14138 46914969 ~ 46915260 (+)
G514436 NA non-coding upstream 16544 46912602 ~ 46912854 (+)
G514433 NA non-coding upstream 18487 46910533 ~ 46910911 (+)
G514427 LOC100380853 non-coding upstream 21227 46907877 ~ 46908171 (+)
G514465 NA non-coding downstream 2416 46932202 ~ 46933128 (+)
G514453 NA non-coding downstream 4007 46933793 ~ 46998665 (+)
G514459 NA non-coding downstream 39138 46968924 ~ 46973262 (+)
G514464 NA other upstream 1684 46926842 ~ 46927714 (+)
G513745 NA other upstream 28275 46900561 ~ 46901123 (+)
G513501 NA other upstream 568813 46359956 ~ 46360585 (+)
LOC110526042 LOC106584891 other upstream 739106 46076084 ~ 46190292 (+)
G512912 NA other upstream 1293148 45635589 ~ 45636250 (+)
G514499 NA other downstream 92508 47022294 ~ 47023092 (+)
G514662 LOC106597055 other downstream 373397 47303183 ~ 47329244 (+)
G514665 NA other downstream 376652 47306438 ~ 47320050 (+)
LOC118964881 LOC106585521 other downstream 584000 47425001 ~ 47519480 (+)
G515069 NA other downstream 1020220 47950006 ~ 47952254 (+)

Expression


Co-expression Network