G514541


Basic Information

Item Value
gene id G514541
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 47103352 ~ 47103562 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU583672
cttatattcttggcatgagtagcaggaagttgaaattgggcatgctatttatccaaaagtgaaaatgctgccccctataccttaagaagttaatgagaagggtgtgcttgaaaggatgcacacaactctgcaatgttgggttgtattggagagagtctcagtcttaaatcattttccacacacagtctgtgcctgtatatatttttcatgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU583672 True 211 lncRNA 0.40 1 47103352 47103562

Neighbor

gene id symbol gene type direction distance location
LOC110526907 NA coding upstream 99000 46993596 ~ 47004352 (+)
LOC110526054 NA coding upstream 125224 46935543 ~ 46978128 (+)
LOC118964876 NA coding upstream 168075 46931084 ~ 46935277 (+)
rasgrf2b rasgrf2 coding upstream 203348 46722960 ~ 46900004 (+)
msh3 LOC106584876 coding upstream 394390 46574935 ~ 46708962 (+)
si:dkey-88e18.2 il12b coding downstream 7250 47110812 ~ 47119011 (+)
LOC110526052 hic2 coding downstream 47338 47150900 ~ 47217434 (+)
LOC118964877 NA coding downstream 291805 47395367 ~ 47398426 (+)
LOC110526909 LOC106585521 coding downstream 317679 47421241 ~ 47424219 (+)
LOC110526910 LOC106585521 coding downstream 347283 47450664 ~ 47494972 (+)
G514530 NA non-coding upstream 24472 47078673 ~ 47078880 (+)
G514461 NA non-coding upstream 61911 47040988 ~ 47041441 (+)
G514457 NA non-coding upstream 63158 47033873 ~ 47040194 (+)
G514496 NA non-coding upstream 84793 47018247 ~ 47018559 (+)
G514495 NA non-coding upstream 85805 47017310 ~ 47017547 (+)
G514545 NA non-coding downstream 4671 47108233 ~ 47181067 (+)
G514614 NA non-coding downstream 133930 47237492 ~ 47237777 (+)
G514628 NA non-coding downstream 152119 47255681 ~ 47256160 (+)
G514639 NA non-coding downstream 164057 47267619 ~ 47267921 (+)
G514641 NA non-coding downstream 165481 47269043 ~ 47269331 (+)
G514499 NA other upstream 80260 47022294 ~ 47023092 (+)
G514464 NA other upstream 175638 46926842 ~ 46927714 (+)
G513745 NA other upstream 202229 46900561 ~ 46901123 (+)
G513501 NA other upstream 742767 46359956 ~ 46360585 (+)
LOC110526042 LOC106584891 other upstream 913060 46076084 ~ 46190292 (+)
G514662 LOC106597055 other downstream 199621 47303183 ~ 47329244 (+)
G514665 NA other downstream 202876 47306438 ~ 47320050 (+)
LOC118964881 LOC106585521 other downstream 410224 47425001 ~ 47519480 (+)
G515069 NA other downstream 846444 47950006 ~ 47952254 (+)
G515189 LOC100135962 other downstream 1448057 48532377 ~ 48587888 (+)

Expression


Co-expression Network