G515132


Basic Information

Item Value
gene id G515132
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 48315260 ~ 48315527 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU584344
caccatagcatcacccacctgtagcacgcgctccagcaggtatatctctctggtcacccccaaaaccaattctttctttggccacctctccttccagttctctgctgccaatgactggaacaaactacaaaaatctctgaaactggaaacacttatctccctcactagctttaagcaccaactgtcagagcagctcacagattactgcacctgtacatagcccacctataatttagcccaatcaactacctctttccctactgtattt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU584344 True 268 lncRNA 0.46 1 48315260 48315527

Neighbor

gene id symbol gene type direction distance location
LOC110512253 LOC106585521 coding upstream 12840 48299720 ~ 48302420 (+)
LOC118964891 LOC106585521 coding upstream 37718 48272553 ~ 48277542 (+)
LOC118964885 LOC106585521 coding upstream 65311 48244976 ~ 48249949 (+)
LOC118964887 LOC106585521 coding upstream 275463 48037087 ~ 48039797 (+)
LOC110512140 LOC106585521 coding upstream 311831 47997906 ~ 48003429 (+)
LOC118936658 LOC106585521 coding downstream 12341 48327868 ~ 48331446 (+)
LOC110526080 LOC106585521 coding downstream 39086 48354613 ~ 48393007 (+)
LOC110514397 LOC106585521 coding downstream 42022 48357549 ~ 48358334 (+)
LOC118964893 LOC106585521 coding downstream 43326 48358853 ~ 48360349 (+)
cntrl cntrl coding downstream 104246 48419773 ~ 48528758 (+)
G515127 LOC106585477 non-coding upstream 24696 48290211 ~ 48290564 (+)
G515061 NA non-coding upstream 592416 47722434 ~ 47722844 (+)
G515057 NA non-coding upstream 598392 47716038 ~ 47716868 (+)
G515056 NA non-coding upstream 605901 47709155 ~ 47709359 (+)
G515051 NA non-coding upstream 609375 47705511 ~ 47705885 (+)
G515135 LOC106585477 non-coding downstream 2203 48317730 ~ 48318344 (+)
G515137 LOC106585477 non-coding downstream 3360 48318887 ~ 48319224 (+)
G515153 NA non-coding downstream 16140 48331667 ~ 48331992 (+)
G515189 LOC100135962 non-coding downstream 216850 48532377 ~ 48587888 (+)
G515190 c5 non-coding downstream 279991 48595518 ~ 48619629 (+)
G515069 NA other upstream 363006 47950006 ~ 47952254 (+)
LOC118964881 LOC106585521 other upstream 798550 47425001 ~ 47519480 (+)
G514662 LOC106597055 other upstream 986016 47303183 ~ 47329244 (+)
G514665 NA other upstream 995210 47306438 ~ 47320050 (+)
G514499 NA other upstream 1292168 47022294 ~ 47023092 (+)
LOC110526072 LOC106587002 other downstream 633090 48948617 ~ 49037542 (+)
edf1 edf1 other downstream 868346 49183291 ~ 49187334 (+)
LOC110526066 LOC106584148 other downstream 918052 49233579 ~ 49260632 (+)
G516011 NA other downstream 989598 49305125 ~ 49307140 (+)

Expression


Co-expression Network