Gene
RNA
| Item | Value |
|---|---|
| gene id | G518354 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 51607349 ~ 51625607 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU587951 | True | 232 | lncRNA | 0.43 | 2 | 51607349 | 51625607 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526137 | cep120 | coding | upstream | 382085 | 51159434 ~ 51225264 (+) |
| znf608 | znf608 | coding | upstream | 479205 | 51113986 ~ 51128144 (+) |
| LOC110526132 | LOC106587036 | coding | upstream | 590221 | 50991573 ~ 51017128 (+) |
| LOC110526128 | NA | coding | upstream | 685243 | 50911697 ~ 50922106 (+) |
| LOC110526127 | LOC106586990 | coding | upstream | 706255 | 50899096 ~ 50901094 (+) |
| LOC118964909 | NA | coding | downstream | 87183 | 51712790 ~ 51718231 (+) |
| homer1b | homer1 | coding | downstream | 257676 | 51883283 ~ 52006875 (+) |
| LOC110493840 | LOC106605670 | coding | downstream | 652087 | 52277694 ~ 52279409 (+) |
| otpb | LOC106587051 | coding | downstream | 759535 | 52385142 ~ 52390468 (+) |
| mapk8ip1b | LOC106587053 | coding | downstream | 898749 | 52524356 ~ 52645645 (+) |
| G518365 | NA | non-coding | upstream | 40790 | 51563330 ~ 51566559 (+) |
| G518181 | snx2 | non-coding | upstream | 261822 | 51337013 ~ 51345527 (+) |
| G518186 | NA | non-coding | upstream | 305811 | 51301268 ~ 51301538 (+) |
| G518185 | NA | non-coding | upstream | 306659 | 51300395 ~ 51300690 (+) |
| G518182 | NA | non-coding | upstream | 312949 | 51294188 ~ 51294400 (+) |
| G518435 | NA | non-coding | downstream | 32726 | 51658333 ~ 51663288 (+) |
| G518452 | NA | non-coding | downstream | 62533 | 51688140 ~ 51688536 (+) |
| G518773 | NA | non-coding | downstream | 110153 | 51735760 ~ 51738373 (+) |
| G518797 | NA | non-coding | downstream | 219594 | 51845201 ~ 51845492 (+) |
| G518799 | NA | non-coding | downstream | 220039 | 51845646 ~ 51845924 (+) |
| LOC118964907 | NA | other | upstream | 872113 | 50719208 ~ 50743120 (+) |
| barhl1a | barhl1 | other | upstream | 1855600 | 49748788 ~ 49753260 (+) |
| LOC118964898 | LOC106585477 | other | upstream | 2220137 | 49347319 ~ 49387212 (+) |
| G516011 | NA | other | upstream | 2300209 | 49305125 ~ 49307140 (+) |
| G519603 | NA | other | downstream | 1026333 | 52651940 ~ 52655297 (+) |
| G521552 | prmt3 | other | downstream | 2300335 | 53925942 ~ 53955130 (+) |
| G521914 | NA | other | downstream | 2644318 | 54269925 ~ 54270259 (+) |
| LOC110526161 | LOC106587065 | other | downstream | 3254092 | 54793125 ~ 54954478 (+) |
