G523403


Basic Information

Item Value
gene id G523403
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 55304241 ~ 55333015 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU593263
aaaatgaatcactaacctttgataatcttcatcagatgacactcataggacatcatgttacacaatacatttatgttttgttcgataatgtgcatatttatatccacaaatctcggtttacattggcgccatgttcagaaatgcctccaaaatatccggagtaattacagagagcctcgtcatataacagaaatactcatcataaactttgatgaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU593263 True 217 lncRNA 0.34 2 55304241 55333015

Neighbor

gene id symbol gene type direction distance location
LOC110526162 NA coding upstream 168619 55127056 ~ 55135622 (+)
LOC118965082 NA coding upstream 235998 55066200 ~ 55068243 (+)
LOC110526161 LOC106587065 coding upstream 349763 54793125 ~ 54954478 (+)
brsk2b LOC106587064 coding upstream 664987 54452454 ~ 54639254 (+)
LOC110526157 LOC106587066 coding upstream 1199505 54082745 ~ 54104736 (+)
LOC110526930 LOC106561912 coding downstream 18714 55351729 ~ 55364742 (+)
LOC110526163 LOC106587071 coding downstream 42081 55375096 ~ 55448136 (+)
LOC110526167 LOC106587078 coding downstream 230424 55563439 ~ 55568167 (+)
LOC110526169 LOC106587076 coding downstream 571049 55904064 ~ 55916081 (+)
LOC110526172 LOC106561172 coding downstream 632207 55965222 ~ 55968091 (+)
G523235 NA non-coding upstream 46872 55251949 ~ 55257369 (+)
G523122 NA non-coding upstream 233239 55070659 ~ 55071002 (+)
G523091 NA non-coding upstream 255307 55048619 ~ 55048934 (+)
G523090 NA non-coding upstream 256680 55047341 ~ 55047561 (+)
G523464 NA non-coding downstream 10222 55343237 ~ 55343462 (+)
G523490 NA non-coding downstream 68317 55401332 ~ 55454861 (+)
G523508 NA non-coding downstream 98778 55431793 ~ 55432133 (+)
G523520 NA non-coding downstream 138740 55471755 ~ 55472673 (+)
G523549 NA non-coding downstream 173265 55506280 ~ 55506566 (+)
G521914 NA other upstream 1033982 54269925 ~ 54270259 (+)
G521552 prmt3 other upstream 1349111 53925942 ~ 53955130 (+)
G519603 NA other upstream 2648944 52651940 ~ 52655297 (+)
LOC110493840 LOC106605670 other upstream 3025243 52277694 ~ 52279409 (+)
G523529 NA other downstream 151234 55484249 ~ 55484607 (+)
LOC110526175 LOC106587084 other downstream 777264 56020625 ~ 56120747 (+)
G525645 NA other downstream 2243069 57576084 ~ 57581070 (+)

Expression


Co-expression Network