G523746


Basic Information

Item Value
gene id G523746
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 55589340 ~ 55636958 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU593647
accataagagactacattttccaagtgtccgcctggtgtcctgcgtggaattcggtgcgcaattgccagctgctagtacttttccatttgatataggggagaaaccatgtgtccaagaacgatgtatcaatgaagagatatgtgaaaaacaccttgatgattgattctaaacaacgttttccgtgttttcagtcgatattatggagttaatttggaaaaaagttcgtgttttgaggactgaattttcagattttttttggtagccaaatgtgatgtataaaacggagctatttctaatacacaaagaatctttttggaaaaactgagcatctgctatctaactgagagtatcctcattgaaaacatcagaagttcttcaaaggtaaatgattttatttgaaggcttttatgtttttgttaatgtctgtctctta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU593647 True 434 lncRNA 0.36 2 55589340 55636958

Neighbor

gene id symbol gene type direction distance location
LOC110526167 LOC106587078 coding upstream 21173 55563439 ~ 55568167 (+)
LOC110526163 LOC106587071 coding upstream 141204 55375096 ~ 55448136 (+)
LOC110526930 LOC106561912 coding upstream 224598 55351729 ~ 55364742 (+)
LOC110526162 NA coding upstream 453718 55127056 ~ 55135622 (+)
LOC118965082 NA coding upstream 521097 55066200 ~ 55068243 (+)
LOC110526169 LOC106587076 coding downstream 267106 55904064 ~ 55916081 (+)
LOC110526172 LOC106561172 coding downstream 328264 55965222 ~ 55968091 (+)
LOC110526171 LOC106587080 coding downstream 334482 55971440 ~ 55980904 (+)
LOC110526173 LOC106587080 coding downstream 345312 55982270 ~ 55990919 (+)
LOC110526175 LOC106587084 coding downstream 383667 56020625 ~ 56120747 (+)
G523721 NA non-coding upstream 26538 55562482 ~ 55562802 (+)
G523719 NA non-coding upstream 29855 55559169 ~ 55559485 (+)
G523709 NA non-coding upstream 36230 55552869 ~ 55553110 (+)
G523700 NA non-coding upstream 42375 55546577 ~ 55546965 (+)
G523785 NA non-coding downstream 25983 55662941 ~ 55663185 (+)
G523786 NA non-coding downstream 28852 55665810 ~ 55666017 (+)
G523792 NA non-coding downstream 43216 55680174 ~ 55680379 (+)
G523793 NA non-coding downstream 44302 55681260 ~ 55681557 (+)
G523795 NA non-coding downstream 49811 55686769 ~ 55687061 (+)
G523529 NA other upstream 104733 55484249 ~ 55484607 (+)
LOC110526161 LOC106587065 other upstream 648467 54793125 ~ 54954478 (+)
G521914 NA other upstream 1319081 54269925 ~ 54270259 (+)
G521552 prmt3 other upstream 1634210 53925942 ~ 53955130 (+)
G525645 NA other downstream 1939126 57576084 ~ 57581070 (+)
G525861 LOC106587122 other downstream 1967150 57604108 ~ 57606367 (+)
fbxo3 fbxo3 other downstream 1984890 57621795 ~ 57635241 (+)

Expression


Co-expression Network