G523809


Basic Information

Item Value
gene id G523809
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 55715820 ~ 55716073 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU593711
ACGTAGTACCGATGAACCGGCTTTATGACATGGGAAATAAACAACACGGGAACCTTTTACACACCTGTTTAGCATGCAGTGTGAATATAATGCTCGGTTATACAATAGTATGATGTTTGCCTAATGTGTAAAGCCCTATGGGAGAAGTTGTTGAAAAGACAAATCCTTTAGGGTGGGATGTACGAGGAAAAATGAAATGAAAGACAGAAGCAAAAgtgcagaccacacacacacacacacacacacacacacat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU593711 True 254 lncRNA 0.41 1 55715820 55716073

Neighbor

gene id symbol gene type direction distance location
LOC110526167 LOC106587078 coding upstream 147653 55563439 ~ 55568167 (+)
LOC110526163 LOC106587071 coding upstream 267684 55375096 ~ 55448136 (+)
LOC110526930 LOC106561912 coding upstream 351078 55351729 ~ 55364742 (+)
LOC110526162 NA coding upstream 580198 55127056 ~ 55135622 (+)
LOC118965082 NA coding upstream 647577 55066200 ~ 55068243 (+)
LOC110526169 LOC106587076 coding downstream 187991 55904064 ~ 55916081 (+)
LOC110526172 LOC106561172 coding downstream 249149 55965222 ~ 55968091 (+)
LOC110526171 LOC106587080 coding downstream 255367 55971440 ~ 55980904 (+)
LOC110526173 LOC106587080 coding downstream 266197 55982270 ~ 55990919 (+)
LOC110526175 LOC106587084 coding downstream 304552 56020625 ~ 56120747 (+)
G523803 NA non-coding upstream 11152 55704404 ~ 55704668 (+)
G523802 LOC106587075 non-coding upstream 12101 55702806 ~ 55703719 (+)
G523801 NA non-coding upstream 13753 55701858 ~ 55702067 (+)
G523798 NA non-coding upstream 16223 55699344 ~ 55699597 (+)
G523795 NA non-coding upstream 28759 55686769 ~ 55687061 (+)
G523816 NA non-coding downstream 10465 55726538 ~ 55726769 (+)
G523817 NA non-coding downstream 12658 55728731 ~ 55728948 (+)
G523822 NA non-coding downstream 21109 55737182 ~ 55737434 (+)
G523825 NA non-coding downstream 28620 55744693 ~ 55744899 (+)
G523826 NA non-coding downstream 30717 55746790 ~ 55747117 (+)
G523529 NA other upstream 231213 55484249 ~ 55484607 (+)
LOC110526161 LOC106587065 other upstream 774947 54793125 ~ 54954478 (+)
G521914 NA other upstream 1445561 54269925 ~ 54270259 (+)
G521552 prmt3 other upstream 1760690 53925942 ~ 53955130 (+)
G525645 NA other downstream 1860011 57576084 ~ 57581070 (+)
G525861 LOC106587122 other downstream 1888035 57604108 ~ 57606367 (+)
fbxo3 fbxo3 other downstream 1905775 57621795 ~ 57635241 (+)

Expression


Co-expression Network