G525611


Basic Information

Item Value
gene id G525611
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 57141681 ~ 57141915 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU595687
ggagtggcttcgtaagaagcatttcaaggtcctggagtggcctagccagtctccagatcttaaccccatagaaaatctttggagggagttgaaaatccgtgttgcccagcaacagccccaaaacatcactgctctagaggagatctgcatggaggaatgggccacaataccagcaacagtgtgtgaaaaccttgtgaagacttacagaaaatgtttgacctctgtcattgccaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU595687 True 235 lncRNA 0.48 1 57141681 57141915

Neighbor

gene id symbol gene type direction distance location
ndufs3 ndufs3 coding upstream 181526 56954134 ~ 56960155 (+)
ptpmt1 ptpmt1 coding upstream 190270 56946354 ~ 56951411 (+)
LOC110526184 LOC106587093 coding upstream 578726 56553850 ~ 56562955 (+)
LOC110526181 madd coding upstream 695816 56362031 ~ 56445865 (+)
nr1h3 nr1h3 coding upstream 784051 56332705 ~ 56357630 (+)
LOC110526197 LOC106587108 coding downstream 120153 57262068 ~ 57277274 (+)
LOC110526201 LOC106587113 coding downstream 366017 57507932 ~ 57550725 (+)
atg13 LOC106587118 coding downstream 416610 57558525 ~ 57568473 (+)
LOC110526205 LOC106587121 coding downstream 445678 57587593 ~ 57591339 (+)
fbxo3 fbxo3 coding downstream 479880 57621795 ~ 57635241 (+)
G525606 NA non-coding upstream 6162 57135285 ~ 57135519 (+)
G525602 NA non-coding upstream 13953 57127497 ~ 57127728 (+)
G525600 NA non-coding upstream 14988 57126405 ~ 57126693 (+)
G525598 NA non-coding upstream 16876 57124583 ~ 57124805 (+)
G525595 NA non-coding upstream 27451 57113974 ~ 57114230 (+)
G525613 NA non-coding downstream 768 57142683 ~ 57143119 (+)
G525615 NA non-coding downstream 2299 57144214 ~ 57144432 (+)
G525623 NA non-coding downstream 16671 57158586 ~ 57158808 (+)
G525625 NA non-coding downstream 26443 57168358 ~ 57168594 (+)
G525627 NA non-coding downstream 51859 57193774 ~ 57193984 (+)
LOC110526175 LOC106587084 other upstream 1020947 56020625 ~ 56120747 (+)
LOC110526169 LOC106587076 other upstream 1225735 55904064 ~ 55916081 (+)
LOC110526167 LOC106587078 other upstream 1575182 55563439 ~ 55568167 (+)
G523529 NA other upstream 1657074 55484249 ~ 55484607 (+)
LOC110526161 LOC106587065 other upstream 2200808 54793125 ~ 54954478 (+)
G525645 NA other downstream 434169 57576084 ~ 57581070 (+)
G525861 LOC106587122 other downstream 462193 57604108 ~ 57606367 (+)
LOC110526214 LOC106587124 other downstream 497559 57639437 ~ 57642487 (+)
G525912 NA other downstream 561543 57703458 ~ 57710340 (+)

Expression


Co-expression Network