XLOC_024432


Basic Information

Item Value
gene id XLOC_024432
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007136.7
NCBI id CM002909.2
chromosome length 37502051
location 4570228 ~ 4578464 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00049325
TAAAAGTCAAAGCATCCACACACAGTTACACTTCAGGAGAGCAATGGAAAATCAAGACTACAGGAAACAGACTCCTAAAAATAACAGTGAAACATCTTACAGGACAGCAGGAAAGTCTTATGACGTTCAAAGCAACTAAAAGCAGAGAGATGTTACCTGATGCTGACCGACAGAGCCGACTCCAGAGGAAGAGTGTACGGCAACAGGATAGCAGAAGCCATTCTGACAGGCAGCATGTTGCTTAACGACTGAAGAAGACTCCGCCTCTCCCGACAGGCCTCCACCAGTGCTGacgagagaacacacacacacacacaaacacacactgtcagAAACACAGAAACAAGTCAAgcataagtaaatagtgagtgcattttaatctttgagtaatCTGTCCCTTTAAGgtctgtgactgtgtgaacatttcaatatttcagagtttaaaacatttggccacaagaaatgtttaataaagtaatatacaatgaagactatccattattcaatatctgtaccaGAATAGTCAATACCTGAAAACTATCATTCACTTTtgtctttattatattttatttatctctgcttgtcatttatttcttatatattatttGAGACTCACTCCTCGAAAAAATCCCGCTAATTATTCAAAC
>TCONS_00049326
TTTTACTGTAAAAGCAACGCTGTAAAAGTCAAAGCATCCACACACAGTTACACTTCAGGAGAGCAATGGAAAATCAAGACTACAGGAAACAGACTCCTAAAAATAACAGTGAAACATCTTACAGGACAGCAGGAAAGTCTTATGACGTTCAAAGCAACTAAAAGAGAGATGTTACCTGATGCTGACCGACAGAGCCGACTCCAGAGGAAGAGTGTACGGCAACAGGATAGCAGAAGCCATTCTGACAGGCAGCATGTTGCTTAACGACTGAAGAAGACTCCGCCTCTCCCGACAGGCCTCCACCAGTGCTGacgagagaacacacacacacacacaaacacacactgtcagAAACACAGAAACAAGTCAAgcataagtaaatagtgagtgcattttaatctttgagtaatCTGTCCCTTTAAGgtctgtgactgtgtgaacatttcaatatttcagagtttaaaacatttggccacaagaaatgtttaataaagtaatatacaatgaagactatccattattcaatatctgtaccaGAATAGTCAATACCTGAAAACTATCATTCACTTTtgtctttattatattttatttatctctgcttgtcatttatttcttatatattatttGAGACTCACTCCTCGAAAAAATCCCGCTAATTATTCAAAC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00049325 False 647 lncRNA 0.38 2 4570228 4578442
TCONS_00049326 True 666 lncRNA 0.38 2 4570228 4578464

Neighbor

gene id symbol gene type direction distance location
XLOC_024431 pidd1 coding downstream 40143 4507288 ~ 4530085 (-)
XLOC_024430 slc25a22a coding downstream 87722 4460039 ~ 4482506 (-)
XLOC_024429 FO907094.1 coding downstream 244497 4325616 ~ 4325731 (-)
XLOC_024428 syt7a coding downstream 256529 4231238 ~ 4313699 (-)
XLOC_024427 NA coding downstream 374885 4194792 ~ 4195343 (-)
XLOC_024433 drd4a coding upstream 128709 4707173 ~ 4733221 (-)
XLOC_024434 cyp19a1b coding upstream 312303 4890767 ~ 4904432 (-)
XLOC_024435 NA coding upstream 351901 4930365 ~ 4931600 (-)
XLOC_024436 shisal1b coding upstream 519598 5098062 ~ 5189989 (-)
XLOC_024437 NA coding upstream 717968 5296432 ~ 5300492 (-)
XLOC_024425 NA non-coding downstream 398471 4168932 ~ 4171757 (-)
XLOC_024421 NA non-coding downstream 685798 3880722 ~ 3884430 (-)
XLOC_024415 NA non-coding downstream 822279 3746164 ~ 3747949 (-)
XLOC_024438 CABZ01039859.2 non-coding upstream 762498 5340962 ~ 5341102 (-)
XLOC_024439 NA non-coding upstream 888029 5466493 ~ 5466809 (-)

Expression


Co-expression Network