XLOC_024435


Basic Information

Item Value
gene id XLOC_024435
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007136.7
NCBI id CM002909.2
chromosome length 37502051
location 4930365 ~ 4931600 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00049327
atttttttGAAAGTTATTAAAATACACGTTTAATTAATAGAATAAAATCCagtgaaaaagtaaaataaacaaagatacaaataacagaaacaaaatcCTTTACTTTATACTCAGTTGAGAATAAAGAGCCCAAGACATTCAGTATGTAGAAGTCAGAAAGTGCGCAGCTCGTATATTTCAGCTTTATATACTGCTCATGCATAGATAAAGATCCACTACTGGGACCGTGCTCAGAAACAGTGTTCAGAAACAGGTTTGTAGAAACAGAGCACAGGTCATTCATAGACACAGGTGTATAACCTAATTAAATCATATGTTCAGGAGCATGCTTAGCAATTTTCCTAATAATAAAGGACGACGCCAAATGTGCTGGTCTCGGCTTTTCCTGTAGTCGTCAGTTTAGTGGAATAAAAACAACATGAGGAAACACAAAGATGCTGAATCTGGATAACTGAGCTACTTTTATTCTTATACTTCAATTTGTTGGCCTGGAGTTGTGTATTAATCATTATTTTCCATGGTATAAGCAATTGTTAGATAgtcattatctttaaataatcGTATAAAAGAGGGCTTAACGGTCAGTATCATGCTTGGTGTGAACGGGTCTGTTATTAGGTTTGTTATTGTAGCATCAGTTTCATGAGCTTATCTGAGGCCGAAGCTCTTTTTTATTCCTCAAAATGATTGTCTTTTTGTAAAATAAGTCATTAATTCTAATAAACTGTCTTTTAATATTCAATAGATGAACCGAGAAATGAAGATACATAGCTGTTGTGTAGAAACAGGTTGGAGAGTTTTCATCTAATGATGGTGGAGGTCAGGTTCATTTAGGATTTGGTGTTGATTTGAGCAAATAAAAATCACAGATTAAATGTTTCTGAAGCAAGTAAGAGATTAACTATAAATGTAATGGCGTCTGTTCTTTGGTCTTCTGATATCTTCAGATCCCCAGAGAGTCTTTGGTGACCTGACATCCGAGCAGGAcattacccacacacacacactgagacagATCgcccactg

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00049327 True 1026 lncRNA 0.35 2 4930365 4931600

Neighbor

gene id symbol gene type direction distance location
XLOC_024434 cyp19a1b coding downstream 25933 4890767 ~ 4904432 (-)
XLOC_024433 drd4a coding downstream 197144 4707173 ~ 4733221 (-)
XLOC_024432 NA coding downstream 351901 4570228 ~ 4578464 (-)
XLOC_024431 pidd1 coding downstream 400280 4507288 ~ 4530085 (-)
XLOC_024430 slc25a22a coding downstream 447859 4460039 ~ 4482506 (-)
XLOC_024436 shisal1b coding upstream 166462 5098062 ~ 5189989 (-)
XLOC_024437 NA coding upstream 364832 5296432 ~ 5300492 (-)
XLOC_024438 CABZ01039859.2 coding upstream 409362 5340962 ~ 5341102 (-)
XLOC_024439 NA coding upstream 534893 5466493 ~ 5466809 (-)
XLOC_024440 AP3B2 coding upstream 770494 5702094 ~ 5740373 (-)
XLOC_024429 FO907094.1 non-coding downstream 604634 4325616 ~ 4325731 (-)
XLOC_024427 NA non-coding downstream 735022 4194792 ~ 4195343 (-)
XLOC_024425 NA non-coding downstream 758608 4168932 ~ 4171757 (-)
XLOC_024441 NA non-coding upstream 844431 5776031 ~ 5777257 (-)
XLOC_024443 CABZ01067754.1 non-coding upstream 952142 5883742 ~ 5903572 (-)

Expression


Co-expression Network