XLOC_024437



Basic Information


Item Value
gene id XLOC_024437
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007136.7
NCBI id CM002909.2
chromosome length 37502051
location 5296432 ~ 5300492 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00049328
GTCTTAGCTATTTACGAAATAGTCGATCACGAGACGCAAAATGGCGTCTGAATGAAAATGGCGCGGCGGTGACGGAAGTTCGGAGGATCCTCAGCCTCACAGGGCAGCATCTGTTTGACTGGTGACCCCATGGCCATCTCCACCGCCCGGATGGCTTTCACCAGCTCTGCAAGTTCATCAGGCTCCAGCGAGGCCGCATGGTCACTGCCTTTCCAGCTTTTATCCAGAGTCACATGACGCTCCAGGACTTTTGCTCCGAGAGCCACAGCAGCTACAGACACATGGATGCCTGTCTCATGTCCGGAGTATCCGATGGGAATGTCCGGAAACTCCTTCTGGAACTCCTGTGGTGGAAAAAGAGGTTAATAAAATGTGCAAAGAACT

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00049328 True 384 lncRNA 0.53 2 5296432 5300492

Neighbor


gene id symbol gene type direction distance location
XLOC_024436 shisal1b coding downstream 106443 5098062 ~ 5189989 (-)
XLOC_024435 NA coding downstream 364832 4930365 ~ 4931600 (-)
XLOC_024434 cyp19a1b coding downstream 392000 4890767 ~ 4904432 (-)
XLOC_024433 drd4a coding downstream 563211 4707173 ~ 4733221 (-)
XLOC_024432 NA coding downstream 717968 4570228 ~ 4578464 (-)
XLOC_024438 CABZ01039859.2 coding upstream 40470 5340962 ~ 5341102 (-)
XLOC_024439 NA coding upstream 166001 5466493 ~ 5466809 (-)
XLOC_024440 AP3B2 coding upstream 401602 5702094 ~ 5740373 (-)
XLOC_024441 NA coding upstream 475539 5776031 ~ 5777257 (-)
XLOC_024442 appl2 coding upstream 490044 5790536 ~ 5815834 (-)
XLOC_024429 FO907094.1 non-coding downstream 970701 4325616 ~ 4325731 (-)
XLOC_024427 NA non-coding downstream 1101089 4194792 ~ 4195343 (-)
XLOC_024443 CABZ01067754.1 non-coding upstream 583250 5883742 ~ 5903572 (-)
XLOC_024444 CABZ01067752.1 non-coding upstream 627679 5928171 ~ 5928286 (-)

Expression



Co-expression Network