XLOC_024439


Basic Information

Item Value
gene id XLOC_024439
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007136.7
NCBI id CM002909.2
chromosome length 37502051
location 5466493 ~ 5466809 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00049076
actgtggagaccccacTTATCAGTTCCCATCAATTCATGCCACCATTCATCAgttcttaaaaattaaataaaaataataataataataaaaatcactgGAGTTTTAACTTCTAAAACTCAACTCTTTTGGACTCTATATAAACAGAAAATAGTAAAACATCCTGATGTAGCAGCTTGGAAcaaaagttcaaataaaaaaaaagaagagatggCTTTTAAATCGCTTTGTCACAGAGTTGGACTGCTGCTACGAGGGAAAAACAAATGGGATCTTCTCAAAGAGTTTATGTCAGGAAGACGAGTTTGGACGCGTCTTT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00049076 True 317 lncRNA 0.34 1 5466493 5466809

Neighbor

gene id symbol gene type direction distance location
XLOC_024438 CABZ01039859.2 coding downstream 125391 5340962 ~ 5341102 (-)
XLOC_024437 NA coding downstream 166001 5296432 ~ 5300492 (-)
XLOC_024436 shisal1b coding downstream 276504 5098062 ~ 5189989 (-)
XLOC_024435 NA coding downstream 534893 4930365 ~ 4931600 (-)
XLOC_024434 cyp19a1b coding downstream 562061 4890767 ~ 4904432 (-)
XLOC_024440 AP3B2 coding upstream 235285 5702094 ~ 5740373 (-)
XLOC_024441 NA coding upstream 309222 5776031 ~ 5777257 (-)
XLOC_024442 appl2 coding upstream 323727 5790536 ~ 5815834 (-)
XLOC_024443 CABZ01067754.1 coding upstream 416933 5883742 ~ 5903572 (-)
XLOC_024444 CABZ01067752.1 coding upstream 461362 5928171 ~ 5928286 (-)
XLOC_024432 NA non-coding downstream 888029 4570228 ~ 4578464 (-)
XLOC_024449 AL929134.1 non-coding upstream 607123 6073932 ~ 6074050 (-)
XLOC_024450 NA non-coding upstream 701317 6168126 ~ 6177023 (-)

Expression


Co-expression Network