XLOC_024441



Basic Information


Item Value
gene id XLOC_024441
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007136.7
NCBI id CM002909.2
chromosome length 37502051
location 5776031 ~ 5777257 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00049329
CATGGGTGTCGATATCTGCTGGGTTTTCTGTGTCTTGTGATGCTTTTTCAGAATTGGCTGGTTGTTGGTCACCATACAAACTCCCTGGCACCATCCCGCCAACCACACATCCCATGCCCAGCGCTGAGTCTGATGAATGCCCGTAGGCACTGCTGTAAAGAGAGCTGGGTCGAGTGCTCTCAATCCCACTGACCACACACCCAATTCCCAAGCTGGACTGAGAGGAATGTCCATATTCACTGCCGGGTATTGGAGATGGCTGTGGGTTCACGCCTGACACAACACATCCTGCTGTTAGTGTGGAGTCAGACGCATGCCCAAAAGCACTGCCAGGCAAAAGAGTGGGCATATGGGTGGCATTGGGTATTACGCAACCCATTTTAAGGGTGCTGTCAGAAGAGTGACCGTATTTACTCCAACGTGGACGAGAGGAGGCGACATCTGATACAAACTCACCCACCCTTATATGGGCGTCAGAGGCATGGCCATGGATATTAG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00049329 True 498 lncRNA 0.52 2 5776031 5777257

Neighbor


gene id symbol gene type direction distance location
XLOC_024440 AP3B2 coding downstream 35658 5702094 ~ 5740373 (-)
XLOC_024439 NA coding downstream 309222 5466493 ~ 5466809 (-)
XLOC_024438 CABZ01039859.2 coding downstream 434929 5340962 ~ 5341102 (-)
XLOC_024437 NA coding downstream 475539 5296432 ~ 5300492 (-)
XLOC_024436 shisal1b coding downstream 586042 5098062 ~ 5189989 (-)
XLOC_024442 appl2 coding upstream 13279 5790536 ~ 5815834 (-)
XLOC_024443 CABZ01067754.1 coding upstream 106485 5883742 ~ 5903572 (-)
XLOC_024444 CABZ01067752.1 coding upstream 150914 5928171 ~ 5928286 (-)
XLOC_024445 nuak1b coding upstream 158681 5935938 ~ 5963535 (-)
XLOC_024446 snx22 coding upstream 215532 5992789 ~ 6011047 (-)
XLOC_024435 NA non-coding downstream 844431 4930365 ~ 4931600 (-)
XLOC_024434 cyp19a1b non-coding downstream 871599 4890767 ~ 4904432 (-)
XLOC_024449 AL929134.1 non-coding upstream 296675 6073932 ~ 6074050 (-)
XLOC_024450 NA non-coding upstream 390869 6168126 ~ 6177023 (-)
XLOC_024453 BX296538.1 non-coding upstream 499461 6276718 ~ 6276855 (-)

Expression



Co-expression Network