G533723


Basic Information

Item Value
gene id G533723
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 64160012 ~ 64160231 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU604408
cctgtactgacctcgccttctggatgatagcggggtgaacaggcagtggctcgggtggttgctgtccttgatgatctttatggccttcctgtgacatcgggtggtgtaggtgtcctggagggccggtagtttgcccccggtgatgcgttgtgcagacctcactaccctctggagagccttacggttgtgggcggagcagttgccgtaccaggcggtgata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU604408 True 220 lncRNA 0.59 1 64160012 64160231

Neighbor

gene id symbol gene type direction distance location
LOC110526331 LOC106587235 coding upstream 127720 64026685 ~ 64032292 (+)
LOC110526326 eif3j coding upstream 397125 63758243 ~ 63762887 (+)
strc1 LOC106587240 coding upstream 402774 63730434 ~ 63757238 (+)
LOC110526325 ctdspl2 coding upstream 432182 63702297 ~ 63727830 (+)
golm2 casc4 coding upstream 460897 63684063 ~ 63699115 (+)
insyn1 LOC106587233 coding downstream 57943 64218174 ~ 64277755 (+)
LOC110526337 LOC106587231 coding downstream 334588 64494819 ~ 64499621 (+)
LOC110526343 LOC106587228 coding downstream 592798 64753029 ~ 64765798 (+)
LOC110526344 LOC106587225 coding downstream 608868 64769099 ~ 64781704 (+)
chrna5 LOC106587222 coding downstream 672393 64832624 ~ 64851098 (+)
G533701 NA non-coding upstream 12186 64147587 ~ 64147826 (+)
G533697 NA non-coding upstream 14158 64145621 ~ 64145854 (+)
G533668 NA non-coding upstream 46191 64113364 ~ 64113821 (+)
G533586 NA non-coding upstream 111330 64048451 ~ 64048682 (+)
G533584 NA non-coding upstream 113535 64046235 ~ 64046477 (+)
G533747 NA non-coding downstream 23516 64183747 ~ 64183985 (+)
G533748 NA non-coding downstream 25480 64185711 ~ 64185919 (+)
G533752 NA non-coding downstream 30559 64190790 ~ 64197078 (+)
G533761 NA non-coding downstream 47472 64207703 ~ 64207909 (+)
G533762 NA non-coding downstream 47911 64208142 ~ 64208400 (+)
G532489 NA other upstream 816257 63308533 ~ 63343755 (+)
LOC100750227 LOC106587244 other upstream 820514 63338236 ~ 63549030 (+)
G532237 LOC106591742 other upstream 961278 63032931 ~ 63198734 (+)
LOC110526311 LOC106587159 other upstream 1145026 63005672 ~ 63068991 (+)
G532259 NA other upstream 1337396 62820420 ~ 62822616 (+)
G534453 NA other downstream 630091 64790322 ~ 64847104 (+)
G534653 NA other downstream 953049 65113280 ~ 65169563 (+)
LOC110526356 LOC106587213 other downstream 996278 65065380 ~ 65178884 (+)
G535150 LOC106587155 other downstream 1687392 65847623 ~ 65849441 (+)

Expression


Co-expression Network