G544565


Basic Information

Item Value
gene id G544565
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 74287778 ~ 74288138 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU616612
CTCATGTCCCTGATCAGGGATACCTTGAGAGGGGGCAAGGCAGCGCCAGCGTCAGATTtgcgtctctctgtgttgtggatGAGTCCTgatgtggggaggagagagagggatgtggctATGGCTTTACATCACCGTCCATTCATCACATTTCAACGAGTGGCTTACCTGGGGGACCCAAACCGGCTGGTGCTGCATCCGTCTTCTCTTTGCTCTCCTGATAATGGAGCAGGTGGGACCACAAGGCAGATTTACCCTGGCAGACGAAGATGGAGATGCGGGAATGAATGAATGCGCATTGAATGCACCTAAATGCAtacatgtgtgttagtgtgtatatatactgtttttaaataacacttgt

Function

NR:

description
DENN domain-containing protein 5A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU616612 True 361 TUCP 0.50 1 74287778 74288138

Neighbor

gene id symbol gene type direction distance location
tub LOC106587536 coding upstream 396000 73793635 ~ 73891981 (+)
rras2 rras2 coding upstream 498535 73744899 ~ 73789243 (+)
copb1 copb coding upstream 546161 73733797 ~ 73741617 (+)
LOC110526547 LOC106587501 coding upstream 555938 73726127 ~ 73731840 (+)
LOC110526546 LOC106587531 coding upstream 652830 73616828 ~ 73634948 (+)
LOC118965098 NA coding downstream 20902 74309040 ~ 74309094 (+)
LOC118965099 NA coding downstream 23203 74311341 ~ 74311395 (+)
LOC118965100 NA coding downstream 25498 74313636 ~ 74313690 (+)
LOC118965101 NA coding downstream 27763 74315901 ~ 74315955 (+)
LOC118965102 NA coding downstream 30063 74318201 ~ 74318255 (+)
G544564 NA non-coding upstream 111 74287327 ~ 74287667 (+)
G544563 NA non-coding upstream 927 74286581 ~ 74286851 (+)
G544560 NA non-coding upstream 4858 74282430 ~ 74282920 (+)
G544559 NA non-coding upstream 5458 74281713 ~ 74282320 (+)
G544554 NA non-coding upstream 15568 74271810 ~ 74272210 (+)
G544567 LOC106587543 non-coding downstream 2840 74290978 ~ 74291200 (+)
G544568 NA non-coding downstream 3248 74291386 ~ 74291658 (+)
G544569 NA non-coding downstream 4809 74292947 ~ 74293257 (+)
G544571 NA non-coding downstream 7220 74295358 ~ 74295852 (+)
G544521 dennd5a non-coding downstream 10741 74298879 ~ 74299518 (+)
LOC100136290 sox6 other upstream 900091 73190979 ~ 73392251 (+)
LOC110526543 LOC106587517 other upstream 1142431 73037953 ~ 73182742 (+)
G542890 NA other upstream 1520927 72765681 ~ 72766851 (+)
saa saa other upstream 1620906 72665460 ~ 72666872 (+)
G542100 LOC106587475 other upstream 2135384 72151020 ~ 72152394 (+)
G545485 NA other downstream 949662 75237800 ~ 75238164 (+)
G545601 NA other downstream 1133723 75421861 ~ 75422752 (+)
G546464 LOC106562315 other downstream 1640090 75928228 ~ 75970674 (+)
LOC110526968 fto other downstream 2599294 76827001 ~ 77038395 (+)
G547884 NA other downstream 2989854 77277992 ~ 77279354 (+)

Expression


Co-expression Network