LOC118965379


Basic Information

Item Value
gene id LOC118965379
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 31073345 ~ 31074263 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052705.1
GATTCTGAACTACAGGTGTTCCTGTGACCTGGCGGTTGTGGGAATGCTGAGGGAGCGCACTTTGGGGAACAGCGTCACTCAGCTATACACCAAGCTGTGTGAGGGACACAGCGAAGCCTGGATGCGGCGGTCTAAACAGTACCGCTGCGAGTGCAAGCACTTCCTTGCCTCGTGCGCCATCCGGCCACAGTTCCCACCACTACCAGAAATGCCAGTGGTGCCCTCACACGTCTGGCTGCTGACCGTGTACAGCATGGATGTGCTTTTGTGGCTTGACAAGGTGACCAAGAAGCTCGCTGGTTACGCTTCGGACACGGGTGCTTGGGCCACAAATTGTGGAGAATGAACACAGGCATGCCCTCAACTGTGTCCTCACTGCTGGTGAGGGCGAGGGCCTGCTAGCCACGGCGGCCGGCCTTATGAAGCGGTACCGACTCGCTGGGATAccagcccccctcccccccagctcATGTACGTGGACCGGGAGTGTTGCTCCAGCAGGTCCAAGACGGTTGCCatgtttgggctcccgagtggcgcagcagtcaaaggcactgcatctcagtgctagaggtgtcataacagacaccctggttcgaatctaggttgtatcacaactggcctt

Function

NR:

description
PREDICTED: uncharacterized protein LOC109615266 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052705.1 True 625 mRNA 0.58 3 31073345 31074263

Neighbor

gene id symbol gene type direction distance location
LOC118965378 NA coding upstream 205 31071742 ~ 31073140 (+)
LOC118965377 NA coding upstream 1727 31052626 ~ 31071618 (+)
LOC110527647 LOC106582629 coding upstream 218529 30733583 ~ 30854816 (+)
if2b LOC106582627 coding upstream 437337 30623484 ~ 30636008 (+)
LOC110527644 sahhb coding upstream 494475 30561586 ~ 30578870 (+)
LOC110527653 LOC106582631 coding downstream 130241 31204504 ~ 31716227 (+)
LOC110531742 LOC106594194 coding downstream 932760 32007023 ~ 32013203 (+)
LOC110528942 NA coding downstream 1122703 32196966 ~ 32257394 (+)
LOC110527657 rbm39 coding downstream 1271385 32345648 ~ 32407998 (+)
nfs1 nfs1 coding downstream 1393750 32468013 ~ 32480794 (+)
G596265 NA non-coding upstream 48302 31024621 ~ 31025043 (+)
G596197 NA non-coding upstream 81078 30989872 ~ 30992267 (+)
G596207 NA non-coding upstream 136896 30936185 ~ 30936449 (+)
G596184 NA non-coding upstream 157895 30915249 ~ 30915450 (+)
G596165 NA non-coding upstream 171097 30902003 ~ 30902248 (+)
G596327 NA non-coding downstream 53058 31127321 ~ 31132421 (+)
G596472 NA non-coding downstream 66010 31140273 ~ 31140492 (+)
G596804 NA non-coding downstream 503261 31577524 ~ 31577843 (+)
G596805 NA non-coding downstream 503683 31577946 ~ 31578145 (+)
G596883 NA non-coding downstream 618653 31692916 ~ 31693284 (+)
G596168 NA other upstream 169458 30903179 ~ 30903887 (+)
G593774 LOC106593940 other upstream 1040724 30031959 ~ 30032621 (+)
G593513 LOC106610831 other upstream 1544435 29528027 ~ 29528910 (+)
LOC110527619 LOC106578599 other upstream 1709994 29329584 ~ 29503787 (+)
G593283 NA other upstream 2008753 29059698 ~ 29064592 (+)
G596297 NA other downstream 7458 31081721 ~ 31082290 (+)
G599004 NA other downstream 2161550 33235813 ~ 33236636 (+)
G599123 NA other downstream 2216263 33290526 ~ 33295528 (+)
G600013 NA other downstream 2892026 33966289 ~ 33966755 (+)

Expression


Co-expression Network