si:ch73-361p23.3 (LOC106582621)


Basic Information

Item Value
gene id si:ch73-361p23.3
gene name LOC106582621
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 42842713 ~ 42845808 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021609308.2
ttttggggttatgctcaggtaaaacaatttggctaatctatacatccatatttccaagtcctaatcttgaagatcaaggggtataataTTTATTGGAATTACAGAAATTCTGATCGACTTTGGTTTTTCAATGTAAATATAGGattgtatcatattatattatacgtagtagaaagtgatgggttagaagaagcctacataaccgaATCATAAAGTCAAATTTAACATCCATATGTGGTCAGCTATGTAAACttcaacattgatttatcctgcaatagatgtggttcaattggtaacatcCATTTTTGTCTTCTTCGAATGCCTCTTaataatctaaaagtaactgaatgtcatcatattacattactgagtttgggtaaccCAAATGttatgttactgattacaattttggacaggtaactggtAACTGATTACTGTCTCACAAACAAAGAGTAAAACAAAAATTCTATATGAGTGGAAGTGACCTGAAGGAAATATAACAAATCTTGAATGACAGAGGATTTTCAGTTGAAAGAATGagagaaatataatttgtttaccaCTCTTGGGGCGGGGATAACTTAAGAGGGACAGGAAATTATGATTCATCACGGAATGTTAACGCAGACATGGTACAGCTGAACTACACCACATCAAATATCGATATAAACTCTAGATATAAGTGAGATTTCATCACCCGAGTAGCTTTTATACAGTTTTACACCCTCTCTCTACAGGTTGACAGGCAGGAGTTCTCTTTTCTATTGGCAGAGTGATATGATGATCCTGTCTAGATTCTGGGTGCTCATCTATGCATGTGTTTTTATTTCTAATGGATCTTTAAATCCCGTGGAGGCTTTTAAATGCAAAATAGGTGAGAGGATAAGTCGAGGAAAAAAGGAACAGTGTGAACCGTGCCCCGACGAGAACTTCCAGGCAGTACCAAATGAATCTCTGCAATGTCAACCCTGCTACTCCTGCAATGAGAGTTCTGGGAGTGAGGTAATATCAAAGTGCACAAAGACTTCTAATGCTAAGTGTCAGTGTCGTGGAGGATTCACTAACAGAGACAAAGACTCTACCATATGCAAGTGTGCCGTCGGTTCTGGGTTGGATAGATCAGGTATAATACTCAAATGCCGTGAATGTGAGCATGGATTCTTTACCACCGACAAGGACTCTACGTGTGCGAAATGGCGAGAATGTGAGAGTGGAGTGAAGACTTCAGGCACTACGATGAGAGATGTCGTCTGTAATGAAGAGTCAGAGTCAGACGGGAAGACCCTCCCCTCCATGCAGCCCACTTCCCCCTCTGGCTCTATCCAGACTGTGTCTAAGTCCTTGATCCAGAACCAGAGCCAAGGGTCATCTCGTCATCCCGATGCCCCCACTGTAACACCAGCCCTCACTGGTCCCAAGTCCCCAACGGCAGACTACGGCCAAGTAATGCCACTCATTGGAATTGTCCTGCTGCTTACTTTTCTACTTACCGCTGTGACCTGCAACCTGGTCATCATTCCTTGCATCAAGAACTACAAGAACCCGGGTGTCAAAACAGCCCAGGACTCAATGTGCCGGAGGCCAGTTGAAGAAAGTGGGGACAGCAGTCTCTCCTCCCTGGTGAAAACACCAAGCTTGGGGGAGCCATGATGGAAAAACCTGGTTATCTGTCTGTCGTAATGCTGCAATTATTCTCAATGCTACTCAGAATAAATGTATTTTAAACCAGAAACAACTTCAGACACCTGTTTGAAAATTAAAAAATATGGTCAATATTTGATTCCCATGTAATCTGTTATTATGGAAAAGCATGTTAGCTGGGCCTATTACTTTGCCTTGCCTCCTTATCCACAAAATGGTTGTTCTTTGCTGCTCTGGGAGATCCGCATGATGTTATTGTCACAAATGGGCTACTGACAAGCTTCTGAGAAATAGGCCTACTACTTCCTTCCTGTGTCTGGTTAAGATTTAGAAGAAAGATAATGTGACAACAATGCCAGTCTGGCAAAATAATGTGAAATATTGTACAATGTGTATTGTGTTAAATTTGGTTGTCGTTTATGTCTTGCAAATTAAACCTTTGAACATTTTACACGA

Function

NR:

description
tumor necrosis factor receptor superfamily member 9-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021609308.2 True 2097 mRNA 0.41 7 42842713 42845808

Neighbor

gene id symbol gene type direction distance location
LOC110527110 LOC106582620 coding downstream 27676 42805342 ~ 42815037 (-)
LOC110527792 LOC106565990 coding downstream 49675 42775477 ~ 42793038 (-)
edem1 LOC106582760 coding downstream 68714 42768087 ~ 42773999 (-)
LOC110527780 LOC107554191 coding downstream 917105 41880174 ~ 41925608 (-)
LOC110527779 LOC106582748 coding downstream 968908 41855223 ~ 41873805 (-)
cplane2 rsg1 coding upstream 39148 42884956 ~ 42887226 (-)
LOC110527797 hspb7 coding upstream 42810 42888618 ~ 42889492 (-)
LOC110527798 epha2 coding upstream 45502 42891310 ~ 42911129 (-)
LOC110527801 LOC106582766 coding upstream 83441 42929249 ~ 42933032 (-)
LOC110527802 LOC106582768 coding upstream 99389 42945197 ~ 42952276 (-)
G610049 NA non-coding downstream 1426 42841058 ~ 42841287 (-)
G610046 LOC100380853 non-coding downstream 8443 42833577 ~ 42834270 (-)
G610040 NA non-coding downstream 13784 42828689 ~ 42828929 (-)
G610025 NA non-coding downstream 38945 42803477 ~ 42803768 (-)
G610024 NA non-coding downstream 43184 42799328 ~ 42799529 (-)
G610058 NA non-coding upstream 6634 42852442 ~ 42852781 (-)
G610084 NA non-coding upstream 44319 42890127 ~ 42890427 (-)
G610090 NA non-coding upstream 63481 42909289 ~ 42909517 (-)
G610093 NA non-coding upstream 67286 42913094 ~ 42913334 (-)
G610096 NA non-coding upstream 70481 42916289 ~ 42916538 (-)
G610047 NA other downstream 6644 42835747 ~ 42836069 (-)
G608900 NA other downstream 817009 41968569 ~ 42025704 (-)
G608888 LOC106582750 other downstream 891469 41944571 ~ 41951244 (-)
LOC110527764 LOC106582736 other downstream 1493814 41156665 ~ 41348915 (-)
G607932 NA other downstream 1679316 41161148 ~ 41163397 (-)
G610182 NA other upstream 261319 43107127 ~ 43162969 (-)
G610190 NA other upstream 267340 43113148 ~ 43116144 (-)
G610183 NA other upstream 282003 43127811 ~ 43167320 (-)
G610185 NA other upstream 305762 43151570 ~ 43157089 (-)
LOC110527812 LOC106582796 other upstream 589770 43435578 ~ 43439076 (-)

Expression


Co-expression Network