G576956


Basic Information

Item Value
gene id G576956
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 13811174 ~ 13811393 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU658045
AGTGAACTAAGTCTATATCCTTACATTTattttcagacttcaaacatgaATTATCCAGCACATTATTCCTAGGACCCTTATATTTCGTCCCTTGTAAGTGGTATTGGGGGAAACACTTGTGGTGTTTTTGAATGTGCTGAACATGAACACGGCTATGTGCAGGCGGAGGGGTTGTCCTCTTTAGAGCGGTCCCTGCGCCGCTGTGTGCCAGGAGAAGGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU658045 True 220 lncRNA 0.45 1 13811174 13811393

Neighbor

gene id symbol gene type direction distance location
LOC110527351 LOC106575518 coding upstream 5131 13714651 ~ 13806043 (+)
cdadc1 LOC106575509 coding upstream 216416 13584213 ~ 13594758 (+)
LOC110527343 LOC106575507 coding upstream 227521 13574849 ~ 13583653 (+)
ebpl ebpl coding upstream 237473 13569310 ~ 13573701 (+)
LOC110527340 LOC106575504 coding upstream 244677 13553095 ~ 13566497 (+)
tsga10 LOC106574631 coding downstream 320048 14131441 ~ 14143542 (+)
LOC110527359 LOC106574634 coding downstream 334818 14146070 ~ 14159585 (+)
LOC110527360 LOC106574621 coding downstream 350506 14161899 ~ 14166522 (+)
LOC118965342 NA coding downstream 406960 14218353 ~ 14230983 (+)
LOC110527363 tm182 coding downstream 439893 14251286 ~ 14259513 (+)
G576917 NA non-coding upstream 735 13806631 ~ 13810439 (+)
G576949 NA non-coding upstream 36442 13771746 ~ 13774732 (+)
G576944 NA non-coding upstream 59635 13751317 ~ 13751539 (+)
G576933 NA non-coding upstream 75540 13735306 ~ 13735634 (+)
G576932 NA non-coding upstream 76063 13734870 ~ 13735111 (+)
G576960 NA non-coding downstream 8866 13820259 ~ 13824499 (+)
G576962 NA non-coding downstream 20086 13831479 ~ 13831827 (+)
G576963 LOC106574593 non-coding downstream 27846 13839239 ~ 13873273 (+)
G576998 NA non-coding downstream 90059 13901452 ~ 13905811 (+)
G576999 NA non-coding downstream 97403 13908796 ~ 13909470 (+)
G576241 LOC106575516 other upstream 321437 13486516 ~ 13489737 (+)
G576161 NA other upstream 603685 13173312 ~ 13207489 (+)
G576160 NA other upstream 638100 13172784 ~ 13173074 (+)
G575758 NA other upstream 1268693 12542017 ~ 12542481 (+)
LOC110528829 LOC106574706 other upstream 1342423 12400616 ~ 12474139 (+)
G577180 LOC106574637 other downstream 303943 14115016 ~ 14116345 (+)
G577261 NA other downstream 361130 14172523 ~ 14180064 (+)
G577561 NA other downstream 594703 14406096 ~ 14406598 (+)

Expression


Co-expression Network