G576998


Basic Information

Item Value
gene id G576998
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 13901452 ~ 13905811 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU658098
ggtagttgatagggctaaattataggtgggctatgtgcaggtgcagtaatctgtgagctgctctgacagttggtgcttaaagctagtgagggagataagtgtttccagtttcagagatttttgtagttcgttccagtcattggcagcagagaactggaaagcgaggcggccaaagaaagaattggttttgggggtgactagagagatatacctgcagcgtgtgctacaggtgggagatgctatggtgaccagcgagctgagataaggggggactttacctagcagggtcttgtagatgacatggagccagtgggtttggcgacgagtatgaagcgagggccagccaacgagagcgtacag

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU658098 True 360 lncRNA 0.50 2 13901452 13905811

Neighbor

gene id symbol gene type direction distance location
LOC110527351 LOC106575518 coding upstream 95409 13714651 ~ 13806043 (+)
cdadc1 LOC106575509 coding upstream 306694 13584213 ~ 13594758 (+)
LOC110527343 LOC106575507 coding upstream 317799 13574849 ~ 13583653 (+)
ebpl ebpl coding upstream 327751 13569310 ~ 13573701 (+)
LOC110527340 LOC106575504 coding upstream 334955 13553095 ~ 13566497 (+)
tsga10 LOC106574631 coding downstream 225630 14131441 ~ 14143542 (+)
LOC110527359 LOC106574634 coding downstream 240400 14146070 ~ 14159585 (+)
LOC110527360 LOC106574621 coding downstream 256088 14161899 ~ 14166522 (+)
LOC118965342 NA coding downstream 312542 14218353 ~ 14230983 (+)
LOC110527363 tm182 coding downstream 345475 14251286 ~ 14259513 (+)
G576963 LOC106574593 non-coding upstream 28179 13839239 ~ 13873273 (+)
G576962 NA non-coding upstream 69625 13831479 ~ 13831827 (+)
G576960 NA non-coding upstream 76953 13820259 ~ 13824499 (+)
G576956 NA non-coding upstream 90059 13811174 ~ 13811393 (+)
G576917 NA non-coding upstream 91013 13806631 ~ 13810439 (+)
G576999 NA non-coding downstream 2985 13908796 ~ 13909470 (+)
G577118 NA non-coding downstream 8635 13914446 ~ 13914661 (+)
G577119 NA non-coding downstream 17024 13922835 ~ 13923252 (+)
G577120 NA non-coding downstream 18468 13924279 ~ 13924695 (+)
G577123 NA non-coding downstream 40107 13945918 ~ 13946252 (+)
G576241 LOC106575516 other upstream 411715 13486516 ~ 13489737 (+)
G576161 NA other upstream 693963 13173312 ~ 13207489 (+)
G576160 NA other upstream 728378 13172784 ~ 13173074 (+)
G575758 NA other upstream 1358971 12542017 ~ 12542481 (+)
LOC110528829 LOC106574706 other upstream 1432701 12400616 ~ 12474139 (+)
G577180 LOC106574637 other downstream 209525 14115016 ~ 14116345 (+)
G577261 NA other downstream 266712 14172523 ~ 14180064 (+)
G577561 NA other downstream 500285 14406096 ~ 14406598 (+)

Expression


Co-expression Network