G576999


Basic Information

Item Value
gene id G576999
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 13908796 ~ 13909470 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU658100
agtgagtggagaggttggtttagggtcacggcgatttagacagctagccaggccaaccggtagcaagctagcataggatggagtctgttgttagccacctcttgcgttcggtcagtagattagtagggttccgtgtggtagaggggattaatccaaatcacacaacaacaacaaaaataagaacaatagatatagttatagaggcccgagaagaaaacataataataaaaataaataaattgtccgattgtctattcagttagcagccggtaagacagctaacggttagcgggccgcagatgggcgttcaggtaacgtcgcgacagaggagccagccggatctcattcaggtagataacgtcggcagtccggttgtgaaggcccggtggggctccgcgtaggcagtgaaacgggtccggataggtgactgcagcccaggagtgaatgatggaactcaggagtgattgacggagctggctagcaccggaacaatcgatgtttgctccggaatcgacgaaagccgactgtcacacggatagcagctagctagctgtgagatccgggtatgaatgtccagagagcagttgaaatccagggacatggagagaaaaattggtccggtatgttccgttccgagccgcgctgtgccgtacaaaactggcgatagattttcga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU658100 True 675 lncRNA 0.50 1 13908796 13909470

Neighbor

gene id symbol gene type direction distance location
LOC110527351 LOC106575518 coding upstream 102753 13714651 ~ 13806043 (+)
cdadc1 LOC106575509 coding upstream 314038 13584213 ~ 13594758 (+)
LOC110527343 LOC106575507 coding upstream 325143 13574849 ~ 13583653 (+)
ebpl ebpl coding upstream 335095 13569310 ~ 13573701 (+)
LOC110527340 LOC106575504 coding upstream 342299 13553095 ~ 13566497 (+)
tsga10 LOC106574631 coding downstream 221971 14131441 ~ 14143542 (+)
LOC110527359 LOC106574634 coding downstream 236741 14146070 ~ 14159585 (+)
LOC110527360 LOC106574621 coding downstream 252429 14161899 ~ 14166522 (+)
LOC118965342 NA coding downstream 308883 14218353 ~ 14230983 (+)
LOC110527363 tm182 coding downstream 341816 14251286 ~ 14259513 (+)
G576998 NA non-coding upstream 2985 13901452 ~ 13905811 (+)
G576963 LOC106574593 non-coding upstream 35523 13839239 ~ 13873273 (+)
G576962 NA non-coding upstream 76969 13831479 ~ 13831827 (+)
G576960 NA non-coding upstream 84297 13820259 ~ 13824499 (+)
G576956 NA non-coding upstream 97403 13811174 ~ 13811393 (+)
G577118 NA non-coding downstream 4976 13914446 ~ 13914661 (+)
G577119 NA non-coding downstream 13365 13922835 ~ 13923252 (+)
G577120 NA non-coding downstream 14809 13924279 ~ 13924695 (+)
G577123 NA non-coding downstream 36448 13945918 ~ 13946252 (+)
G577164 NA non-coding downstream 103198 14012668 ~ 14012880 (+)
G576241 LOC106575516 other upstream 419059 13486516 ~ 13489737 (+)
G576161 NA other upstream 701307 13173312 ~ 13207489 (+)
G576160 NA other upstream 735722 13172784 ~ 13173074 (+)
G575758 NA other upstream 1366315 12542017 ~ 12542481 (+)
LOC110528829 LOC106574706 other upstream 1440045 12400616 ~ 12474139 (+)
G577180 LOC106574637 other downstream 205866 14115016 ~ 14116345 (+)
G577261 NA other downstream 263053 14172523 ~ 14180064 (+)
G577561 NA other downstream 496626 14406096 ~ 14406598 (+)

Expression


Co-expression Network