G577120


Basic Information

Item Value
gene id G577120
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 13924279 ~ 13924695 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU658241
gtcaactgtagctgcagcctgcctctctctctcagtcaagtgTAGCCGCAACCTgcttctctctcagtcaactgtagctgcaacctgcctctctctcagtcaactgtagccgCAACCTGCTTCTCTCACAGTCAACTGTAGCTggaacctgcctctctctctcaatcaactgtagctgcagcctgcctctctctctctcagtcaactgtagctgcaggctgcctctctctctcagtcaactgtagctggaacctgcctctctctctctcagtcaactgtagctgcagcatgcctctctctctctcagtcaactgtagctgcagactgcctctctctctcagtcaactctagctgcaacctgcctgtttcccagtcaactgtagctgcaacctgcttctctctcattcaactgtagct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU658241 True 417 lncRNA 0.53 1 13924279 13924695

Neighbor

gene id symbol gene type direction distance location
LOC110527351 LOC106575518 coding upstream 118236 13714651 ~ 13806043 (+)
cdadc1 LOC106575509 coding upstream 329521 13584213 ~ 13594758 (+)
LOC110527343 LOC106575507 coding upstream 340626 13574849 ~ 13583653 (+)
ebpl ebpl coding upstream 350578 13569310 ~ 13573701 (+)
LOC110527340 LOC106575504 coding upstream 357782 13553095 ~ 13566497 (+)
tsga10 LOC106574631 coding downstream 206746 14131441 ~ 14143542 (+)
LOC110527359 LOC106574634 coding downstream 221516 14146070 ~ 14159585 (+)
LOC110527360 LOC106574621 coding downstream 237204 14161899 ~ 14166522 (+)
LOC118965342 NA coding downstream 293658 14218353 ~ 14230983 (+)
LOC110527363 tm182 coding downstream 326591 14251286 ~ 14259513 (+)
G577119 NA non-coding upstream 1027 13922835 ~ 13923252 (+)
G577118 NA non-coding upstream 9618 13914446 ~ 13914661 (+)
G576999 NA non-coding upstream 14809 13908796 ~ 13909470 (+)
G576998 NA non-coding upstream 18468 13901452 ~ 13905811 (+)
G576963 LOC106574593 non-coding upstream 51006 13839239 ~ 13873273 (+)
G577123 NA non-coding downstream 21223 13945918 ~ 13946252 (+)
G577164 NA non-coding downstream 87973 14012668 ~ 14012880 (+)
G577203 NA non-coding downstream 127029 14051724 ~ 14052082 (+)
G577205 NA non-coding downstream 132511 14057206 ~ 14057770 (+)
G577216 NA non-coding downstream 149432 14074127 ~ 14074335 (+)
G576241 LOC106575516 other upstream 434542 13486516 ~ 13489737 (+)
G576161 NA other upstream 716790 13173312 ~ 13207489 (+)
G576160 NA other upstream 751205 13172784 ~ 13173074 (+)
G575758 NA other upstream 1381798 12542017 ~ 12542481 (+)
LOC110528829 LOC106574706 other upstream 1455528 12400616 ~ 12474139 (+)
G577180 LOC106574637 other downstream 190641 14115016 ~ 14116345 (+)
G577261 NA other downstream 247828 14172523 ~ 14180064 (+)
G577561 NA other downstream 481401 14406096 ~ 14406598 (+)

Expression


Co-expression Network