G592111


Basic Information

Item Value
gene id G592111
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 27429577 ~ 27429873 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU675033
ggtggaatggagctgaagggtgggactaataacaagataaacaatgtaaagcatacgggatctgtaaaatgtatataggttcggaACTTCTGTGAAATAgcatagttacaaatagaaatcaaactggatggatatcagaaatagaggaaggactaagaacaaacaagatataactattgtaaagtagtctgtgtctgtaaaatgtgtataagatgtataaattgaaggtaaaagcagaagtgtttattagtttactccaattgggggatcggcggTAGGGTTagcggggaataataa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU675033 True 297 lncRNA 0.36 1 27429577 27429873

Neighbor

gene id symbol gene type direction distance location
LOC118965273 NA coding upstream 834426 26585519 ~ 26595151 (+)
n6amt1 n6amt1 coding upstream 885893 26535783 ~ 26543684 (+)
jam2a LOC106575111 coding upstream 1457179 25956422 ~ 25972398 (+)
mrpl39 LOC106575108 coding upstream 1480257 25939547 ~ 25949320 (+)
LOC110527579 LOC106575110 coding upstream 1495213 25921719 ~ 25934364 (+)
LOC110527592 LOC106575150 coding downstream 28821 27458694 ~ 27482580 (+)
LOC110527593 LOC106575124 coding downstream 76036 27505909 ~ 27555139 (+)
plekha3 LOC106575131 coding downstream 424425 27854006 ~ 27874521 (+)
LOC100653476 LOC106575134 coding downstream 715663 28145536 ~ 28168201 (+)
LOC118965275 LOC106575153 coding downstream 791752 28221625 ~ 28258442 (+)
G592095 NA non-coding upstream 23845 27405533 ~ 27405732 (+)
G592087 NA non-coding upstream 28763 27400595 ~ 27400814 (+)
G592082 NA non-coding upstream 33325 27395982 ~ 27396252 (+)
G592002 NA non-coding upstream 83760 27345581 ~ 27345817 (+)
G592000 NA non-coding upstream 84213 27345147 ~ 27345364 (+)
G592127 NA non-coding downstream 16836 27446709 ~ 27448084 (+)
G592128 NA non-coding downstream 21124 27450997 ~ 27451257 (+)
G592130 NA non-coding downstream 24919 27454792 ~ 27455043 (+)
G592132 NA non-coding downstream 28134 27458007 ~ 27458271 (+)
G592135 NA non-coding downstream 55162 27485035 ~ 27485772 (+)
G590949 LOC106575121 other upstream 851644 26577407 ~ 26577933 (+)
G590936 gart other upstream 876035 26552554 ~ 26553542 (+)
G589933 NA other upstream 1404268 26003930 ~ 26025309 (+)
G589734 NA other upstream 1820971 25587088 ~ 25608606 (+)
G588755 NA other upstream 2523996 24904331 ~ 24905581 (+)
G592134 NA other downstream 53177 27483050 ~ 27483796 (+)
G592445 lig4 other downstream 273710 27703583 ~ 27707294 (+)
G593144 NA other downstream 1405336 28835209 ~ 28841083 (+)
G593171 NA other downstream 1462290 28892163 ~ 28892425 (+)

Expression


Co-expression Network