G592472


Basic Information

Item Value
gene id G592472
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 27725904 ~ 27726181 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU675403
gccaaatacaggaccattctggaagaaaacctgatggagtctgcgaaagacctgagactgggacggagatttgtcttccaacaagacaatgatccaaaacataaagcaaaatctacaatggaatggttcaaaaataaacatatccaggtgttagaatggccaagtcaaagcccagacctgaatccaatcgagaatctgtggaaagaactgaaaactgctgttcacaaatgctctccatccatccaacctcactgagctcgagctgttttgcaaggagg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU675403 True 278 lncRNA 0.44 1 27725904 27726181

Neighbor

gene id symbol gene type direction distance location
LOC110527593 LOC106575124 coding upstream 171149 27505909 ~ 27555139 (+)
LOC110527592 LOC106575150 coding upstream 243324 27458694 ~ 27482580 (+)
LOC118965273 NA coding upstream 1130753 26585519 ~ 26595151 (+)
n6amt1 n6amt1 coding upstream 1182220 26535783 ~ 26543684 (+)
jam2a LOC106575111 coding upstream 1753506 25956422 ~ 25972398 (+)
plekha3 LOC106575131 coding downstream 128117 27854006 ~ 27874521 (+)
LOC100653476 LOC106575134 coding downstream 419355 28145536 ~ 28168201 (+)
LOC118965275 LOC106575153 coding downstream 495444 28221625 ~ 28258442 (+)
LOC110527602 LOC105007064 coding downstream 580086 28306267 ~ 28368030 (+)
mtx2 mtx2 coding downstream 940235 28666416 ~ 28686793 (+)
G592447 NA non-coding upstream 13117 27712653 ~ 27712787 (+)
G592444 NA non-coding upstream 23097 27702486 ~ 27702807 (+)
G592438 NA non-coding upstream 26483 27699077 ~ 27699421 (+)
G592432 NA non-coding upstream 27960 27697646 ~ 27697944 (+)
G592278 NA non-coding upstream 34215 27691604 ~ 27691689 (+)
G592481 LOC100846954 non-coding downstream 8265 27734446 ~ 27734785 (+)
G592485 NA non-coding downstream 14836 27741017 ~ 27744833 (+)
G592568 NA non-coding downstream 124568 27850749 ~ 27892133 (+)
G592567 NA non-coding downstream 161131 27887312 ~ 27889004 (+)
G592582 LOC106575132 non-coding downstream 168862 27895043 ~ 27895354 (+)
G592445 lig4 other upstream 18610 27703583 ~ 27707294 (+)
G592134 NA other upstream 242108 27483050 ~ 27483796 (+)
G590949 LOC106575121 other upstream 1147971 26577407 ~ 26577933 (+)
G590936 gart other upstream 1172362 26552554 ~ 26553542 (+)
G589933 NA other upstream 1700595 26003930 ~ 26025309 (+)
G593144 NA other downstream 1109028 28835209 ~ 28841083 (+)
G593171 NA other downstream 1165982 28892163 ~ 28892425 (+)
G593283 NA other downstream 1333517 29059698 ~ 29064592 (+)
LOC110527619 LOC106578599 other downstream 1603491 29329584 ~ 29503787 (+)

Expression


Co-expression Network