G593051


Basic Information

Item Value
gene id G593051
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 28654223 ~ 28654854 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU676044
GtctaatacaaacagtgtagttataccCCTcaaaaggcaatcaaacaggcaaaacgtcagtacagagacaaagtggacaGCTCAGGCACAAGAGAAATGCGGCAGGGTCTAAagacaatcatggattacaaaaggaaaaccagccacgccGTGGACACTGAACTGAACTAAACGACTATCACTCCGTAGTACTCACTtctcatgaagtgctttgagaggcttgTTAAGGATCGtaatcacctccaccttacatcctagacccacttcaattttcttaccgtcccaatagatccacagacaatgcaaatgcaattgcactgcacacttccctatctcatctggacaagaggaataccgacgtcagaatgctgttcattgactatagctcagcattcaacactatgtAACCTttcaaactcatcattaagctcgggtccctgggtctgaacttgtgcaactgggtcctggacttcctgacgggccgcccccaggtggtgaaggtaggaaacaacacctccacttcgctgatcctcaacacaggggccccacaagggtgcgtgctcagccccctcctgtactccctgttcaaccatgactgcatggccacgcttgcctctaactcaatcatcaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU676044 True 632 lncRNA 0.48 1 28654223 28654854

Neighbor

gene id symbol gene type direction distance location
LOC110527602 LOC105007064 coding upstream 286193 28306267 ~ 28368030 (+)
LOC118965275 LOC106575153 coding upstream 395781 28221625 ~ 28258442 (+)
LOC100653476 LOC106575134 coding upstream 486022 28145536 ~ 28168201 (+)
plekha3 LOC106575131 coding upstream 779702 27854006 ~ 27874521 (+)
LOC110527593 LOC106575124 coding upstream 1099468 27505909 ~ 27555139 (+)
mtx2 mtx2 coding downstream 11562 28666416 ~ 28686793 (+)
LOC110527611 rbm45 coding downstream 99622 28754476 ~ 28780185 (+)
LOC110527622 LOC106564406 coding downstream 257786 28912640 ~ 28921397 (+)
LOC118965279 LOC106595049 coding downstream 320629 28975483 ~ 28977613 (+)
LOC118965280 NA coding downstream 332492 28987346 ~ 28992237 (+)
G593046 NA non-coding upstream 6767 28647256 ~ 28647456 (+)
G593028 NA non-coding upstream 35889 28610618 ~ 28618334 (+)
G593012 LOC100196534 non-coding upstream 66779 28586298 ~ 28587444 (+)
G593007 NA non-coding upstream 71457 28573938 ~ 28582766 (+)
G593006 NA non-coding upstream 75895 28568098 ~ 28578328 (+)
G593059 NA non-coding downstream 33356 28688210 ~ 28688881 (+)
G593093 NA non-coding downstream 74553 28729407 ~ 28729613 (+)
G593111 NA non-coding downstream 89767 28744621 ~ 28744909 (+)
G593135 NA non-coding downstream 168085 28822939 ~ 28823223 (+)
G592445 lig4 other upstream 946929 27703583 ~ 27707294 (+)
G592134 NA other upstream 1170427 27483050 ~ 27483796 (+)
G590949 LOC106575121 other upstream 2076290 26577407 ~ 26577933 (+)
G590936 gart other upstream 2100681 26552554 ~ 26553542 (+)
G593144 NA other downstream 180355 28835209 ~ 28841083 (+)
G593171 NA other downstream 237309 28892163 ~ 28892425 (+)
G593283 NA other downstream 404844 29059698 ~ 29064592 (+)
LOC110527619 LOC106578599 other downstream 674818 29329584 ~ 29503787 (+)
G593513 LOC106610831 other downstream 873173 29528027 ~ 29528910 (+)

Expression


Co-expression Network