G593059


Basic Information

Item Value
gene id G593059
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 28688210 ~ 28688881 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU676052
aggtggcatcctatgacggtttcaacgccacgttgaaagtcactgaactatTCAGTAAGGACATTCCATTGCCAATgtttgtggctgaaatagctgaatccactaatttgaaggggtgtccacatgcaTTTGTACatgcagtggggagaacaagtatttgatttaAGCtaattatgagtaggcattgcATGCTTATTGGTTGATGCATTGTAAACACATAGAAATGTGCTATTATCACATAcactatacagtggggagaacaagtatttgatacgctgccgattttgcaggttttcctacttacaaagcatgaagtggtctgtaatttttatcataggtacacttcaactgtgagagacggaatctaaaacaaaaatccagaaaatcacattgtataatttGAAGTcgttcatttgcattttattgcatgacataagtatttgatcacctaccaaccagtaagaatttcgtctgtcacagacctgttagtttttctttaagaagccctcctgttctccactcattacctgtattaactgcacctgtttgaactcgttacctgtataaaagacacctatccacacactcaatcaaacacactccaacctctccacaatggccaagaccagggagctgtgtaaggacatcagggataaaattgtagacctgcac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU676052 True 672 lncRNA 0.39 1 28688210 28688881

Neighbor

gene id symbol gene type direction distance location
mtx2 mtx2 coding upstream 1417 28666416 ~ 28686793 (+)
LOC110527602 LOC105007064 coding upstream 320180 28306267 ~ 28368030 (+)
LOC118965275 LOC106575153 coding upstream 429768 28221625 ~ 28258442 (+)
LOC100653476 LOC106575134 coding upstream 520009 28145536 ~ 28168201 (+)
plekha3 LOC106575131 coding upstream 813689 27854006 ~ 27874521 (+)
LOC110527611 rbm45 coding downstream 65595 28754476 ~ 28780185 (+)
LOC110527622 LOC106564406 coding downstream 223759 28912640 ~ 28921397 (+)
LOC118965279 LOC106595049 coding downstream 286602 28975483 ~ 28977613 (+)
LOC118965280 NA coding downstream 298465 28987346 ~ 28992237 (+)
LOC110527630 NA coding downstream 322097 29010978 ~ 29013251 (+)
G593051 NA non-coding upstream 33356 28654223 ~ 28654854 (+)
G593046 NA non-coding upstream 40754 28647256 ~ 28647456 (+)
G593028 NA non-coding upstream 69876 28610618 ~ 28618334 (+)
G593012 LOC100196534 non-coding upstream 100766 28586298 ~ 28587444 (+)
G593007 NA non-coding upstream 105444 28573938 ~ 28582766 (+)
G593093 NA non-coding downstream 40526 28729407 ~ 28729613 (+)
G593111 NA non-coding downstream 55740 28744621 ~ 28744909 (+)
G593135 NA non-coding downstream 134058 28822939 ~ 28823223 (+)
G593139 NA non-coding downstream 138359 28827240 ~ 28827484 (+)
G592445 lig4 other upstream 980916 27703583 ~ 27707294 (+)
G592134 NA other upstream 1204414 27483050 ~ 27483796 (+)
G590949 LOC106575121 other upstream 2110277 26577407 ~ 26577933 (+)
G590936 gart other upstream 2134668 26552554 ~ 26553542 (+)
G593144 NA other downstream 146328 28835209 ~ 28841083 (+)
G593171 NA other downstream 203282 28892163 ~ 28892425 (+)
G593283 NA other downstream 370817 29059698 ~ 29064592 (+)
LOC110527619 LOC106578599 other downstream 640791 29329584 ~ 29503787 (+)
G593513 LOC106610831 other downstream 839146 29528027 ~ 29528910 (+)

Expression


Co-expression Network