G593139


Basic Information

Item Value
gene id G593139
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 28827240 ~ 28827484 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU676133
gcacacatcacggacaaactgaattggtccacccacacagacagcgtggtgatgaaggcgcagcagcgcctcttcaacctcaggaggctgaagaaatccggcttgtcaccaaaagcactcacaaacttttacagatgcacaatcgagagcatcctgttgggctgtatcaccgcctagtacggcaactgctccgcccacaaccgtaaggctctccagagggtagtgaggtctgcacaacacatcac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU676133 True 245 lncRNA 0.54 1 28827240 28827484

Neighbor

gene id symbol gene type direction distance location
LOC110527611 rbm45 coding upstream 47055 28754476 ~ 28780185 (+)
mtx2 mtx2 coding upstream 140447 28666416 ~ 28686793 (+)
LOC110527602 LOC105007064 coding upstream 459210 28306267 ~ 28368030 (+)
LOC118965275 LOC106575153 coding upstream 568798 28221625 ~ 28258442 (+)
LOC100653476 LOC106575134 coding upstream 659039 28145536 ~ 28168201 (+)
LOC110527622 LOC106564406 coding downstream 85156 28912640 ~ 28921397 (+)
LOC118965279 LOC106595049 coding downstream 147999 28975483 ~ 28977613 (+)
LOC118965280 NA coding downstream 159862 28987346 ~ 28992237 (+)
LOC110527630 NA coding downstream 183494 29010978 ~ 29013251 (+)
LOC110527620 NA coding downstream 198847 29026331 ~ 29035347 (+)
G593135 NA non-coding upstream 4017 28822939 ~ 28823223 (+)
G593111 NA non-coding upstream 82331 28744621 ~ 28744909 (+)
G593093 NA non-coding upstream 97627 28729407 ~ 28729613 (+)
G593059 NA non-coding upstream 138359 28688210 ~ 28688881 (+)
G593142 NA non-coding downstream 6368 28833852 ~ 28834238 (+)
G593145 NA non-coding downstream 11640 28839124 ~ 28844604 (+)
G593147 NA non-coding downstream 17535 28845019 ~ 28845233 (+)
G593150 NA non-coding downstream 22559 28850043 ~ 28850280 (+)
G593102 NA non-coding downstream 23397 28850881 ~ 28851394 (+)
plekha3 LOC106575131 other upstream 952819 27854006 ~ 27874521 (+)
G592445 lig4 other upstream 1119946 27703583 ~ 27707294 (+)
G592134 NA other upstream 1343444 27483050 ~ 27483796 (+)
G590949 LOC106575121 other upstream 2249307 26577407 ~ 26577933 (+)
G590936 gart other upstream 2273698 26552554 ~ 26553542 (+)
G593144 NA other downstream 7725 28835209 ~ 28841083 (+)
G593171 NA other downstream 64679 28892163 ~ 28892425 (+)
G593283 NA other downstream 232214 29059698 ~ 29064592 (+)
LOC110527619 LOC106578599 other downstream 502188 29329584 ~ 29503787 (+)
G593513 LOC106610831 other downstream 700543 29528027 ~ 29528910 (+)

Expression


Co-expression Network