G593370


Basic Information

Item Value
gene id G593370
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 29301795 ~ 29308953 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU676407
ggggaggggctctttggtggcgtgacagtttgattgtgtgtgctgtgctgcagaagttttgtttgttttcagcgtgtgtagtttatagagtatttaactcaatcatcggtgtaatcgctctaggtcgtggttgttttcgtttgggaccgcgcccgttatggatcgcatggattagtagcaacattgttgcgaagctttaacatacaaaccatcggacagtcagacagtacacctgcacgcctgaagaccacagctaagatctctcttgttctctttctctttttctcttccctctatcgttccagtgctttaccctgaaacagactctctatttttccaatgcacttcccattgaagttcattagagctggactattattgccctgccagaagtatttggacatttcagttaaaagggaggttgcttgcaaattgtgtattgttatgtgaactgtattgagatgtactaatgacatgtggccgagaagactggacatttttaaggcctttgttgtgtcgatgaacaccccccacattcataccctctgcactcatctactagaaaataatacagattattgcaaatcctatgttgatgactgggttcgttcttgtatgaagttgctgttgaattgctctgccattattagtattagtattattgtatgaggtattcttgtttgggttaccccggtgctgtgatgtgggttttatatggtgtgtattcttttttctctccactggctatctggtaaacaggctacactctaggcagtctcttctgctgatgtgtgtgggtctggtagtggttctctctattctactcttttcctttcggcatggttaatacctgcctggcgcccgaacaaaagctttctttacccctctctaataaataccgctacaagGTCAATAGGTCATACCACCCTTTTATAGTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU676407 True 939 lncRNA 0.43 2 29301795 29308953

Neighbor

gene id symbol gene type direction distance location
LOC110527621 NA coding upstream 202384 29087111 ~ 29099411 (+)
LOC110527620 NA coding upstream 267189 29026331 ~ 29035347 (+)
LOC110527630 NA coding upstream 288544 29010978 ~ 29013251 (+)
LOC118965280 NA coding upstream 309558 28987346 ~ 28992237 (+)
LOC118965279 LOC106595049 coding upstream 324182 28975483 ~ 28977613 (+)
LOC110527619 LOC106578599 coding downstream 20631 29329584 ~ 29503787 (+)
LOC118965283 NA coding downstream 80664 29389617 ~ 29396184 (+)
LOC118965282 NA coding downstream 104917 29413870 ~ 29442670 (+)
LOC110527623 NA coding downstream 254856 29563350 ~ 29636769 (+)
LOC110527616 NA coding downstream 377463 29686416 ~ 29703056 (+)
G593367 NA non-coding upstream 3123 29297976 ~ 29298672 (+)
G593366 NA non-coding upstream 4368 29297128 ~ 29297427 (+)
G593365 NA non-coding upstream 5441 29296117 ~ 29296354 (+)
G593358 NA non-coding upstream 16153 29285437 ~ 29285642 (+)
G593344 NA non-coding upstream 22340 29195613 ~ 29279455 (+)
G593441 NA non-coding downstream 107904 29416857 ~ 29418493 (+)
G593444 NA non-coding downstream 111952 29420905 ~ 29463664 (+)
G593493 NA non-coding downstream 178842 29487795 ~ 29539669 (+)
G593513 LOC106610831 non-coding downstream 219074 29528027 ~ 29528910 (+)
G593283 NA other upstream 237203 29059698 ~ 29064592 (+)
G593171 NA other upstream 409370 28892163 ~ 28892425 (+)
G593144 NA other upstream 460712 28835209 ~ 28841083 (+)
plekha3 LOC106575131 other upstream 1427374 27854006 ~ 27874521 (+)
G592445 lig4 other upstream 1594501 27703583 ~ 27707294 (+)
G593774 LOC106593940 other downstream 723006 30031959 ~ 30032621 (+)
G596168 NA other downstream 1594226 30903179 ~ 30903887 (+)
G596297 NA other downstream 1772768 31081721 ~ 31082290 (+)

Expression


Co-expression Network