G593628


Basic Information

Item Value
gene id G593628
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 29781127 ~ 29822082 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU676690
ttattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatatctgaatgatccaatgttgacctaattgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactttgatagtctcagaggtccgttaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaagtttaaagccggatttggatacaaaaagatttcccaagctttaaacatcccaaggagc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU676690 True 298 lncRNA 0.42 2 29781127 29822082

Neighbor

gene id symbol gene type direction distance location
LOC110527616 NA coding upstream 78071 29686416 ~ 29703056 (+)
LOC110527623 NA coding upstream 144358 29563350 ~ 29636769 (+)
LOC110527619 LOC106578599 coding upstream 277340 29329584 ~ 29503787 (+)
trnak-uuu-3 NA coding downstream 68797 29890879 ~ 29890951 (+)
LOC110528937 NA coding downstream 109743 29931825 ~ 29944679 (+)
LOC110527618 NA coding downstream 152884 29974966 ~ 29983540 (+)
LOC110527626 NA coding downstream 187586 30009668 ~ 30016052 (+)
LOC110527639 NA coding downstream 356315 30178397 ~ 30203326 (+)
G593597 NA non-coding upstream 66100 29714713 ~ 29715027 (+)
G593493 NA non-coding upstream 241458 29487795 ~ 29539669 (+)
G593513 LOC106610831 non-coding upstream 252217 29528027 ~ 29528910 (+)
G593444 NA non-coding upstream 317463 29420905 ~ 29463664 (+)
G593662 NA non-coding downstream 16358 29838440 ~ 29839079 (+)
G593695 NA non-coding downstream 86755 29908837 ~ 29909102 (+)
G593708 NA non-coding downstream 99340 29921422 ~ 29970210 (+)
G593716 NA non-coding downstream 108796 29930878 ~ 29974579 (+)
G593747 NA non-coding downstream 151545 29973627 ~ 30124102 (+)
G593283 NA other upstream 716535 29059698 ~ 29064592 (+)
G593171 NA other upstream 888702 28892163 ~ 28892425 (+)
G593144 NA other upstream 940044 28835209 ~ 28841083 (+)
G593774 LOC106593940 other downstream 209877 30031959 ~ 30032621 (+)
G596168 NA other downstream 1081097 30903179 ~ 30903887 (+)
G596297 NA other downstream 1259639 31081721 ~ 31082290 (+)
LOC110531742 LOC106594194 other downstream 2187232 32007023 ~ 32013203 (+)
G599004 NA other downstream 3413731 33235813 ~ 33236636 (+)

Expression


Co-expression Network