G596160


Basic Information

Item Value
gene id G596160
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 30899207 ~ 30899519 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU679418
TCACCGGATTATCTCATCCATTGTTCTATGATCGGCATATAGCCTATGCTGGGTTTTTAGAGGAACCTGGCTAAAATAATTGAATAGCCTACATGGATTAAAAGGGGATGTCCGCTCACCGTTTTGCTGCTGCCAAACATGATATTTTAATACAGCTTTGGTGAGTAAGATTGATGTCAAAGCGGTCTCACGAGCCAAACCCTTTATCGATAGTCTTGACTACTTGGCGAATGCATTGGGCaggataaaaacaaacaaaaacacagccTTCATTGAGAGGAGGCTATGCTTGTTTTTTAATCAAACTAAACTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU679418 True 313 lncRNA 0.40 1 30899207 30899519

Neighbor

gene id symbol gene type direction distance location
LOC110527647 LOC106582629 coding upstream 44391 30733583 ~ 30854816 (+)
if2b LOC106582627 coding upstream 263199 30623484 ~ 30636008 (+)
LOC110527644 sahhb coding upstream 320337 30561586 ~ 30578870 (+)
LOC110527643 chmp4b coding upstream 363080 30509261 ~ 30536127 (+)
LOC110527642 cssa12h20orf85 coding upstream 399648 30461359 ~ 30499559 (+)
LOC118965377 NA coding downstream 153107 31052626 ~ 31071618 (+)
LOC118965378 NA coding downstream 172223 31071742 ~ 31073140 (+)
LOC118965379 NA coding downstream 173826 31073345 ~ 31074263 (+)
LOC110527653 LOC106582631 coding downstream 304985 31204504 ~ 31716227 (+)
LOC110531742 LOC106594194 coding downstream 1107504 32007023 ~ 32013203 (+)
G596157 NA non-coding upstream 1432 30897523 ~ 30897775 (+)
G596150 NA non-coding upstream 6569 30892365 ~ 30892638 (+)
G596142 NA non-coding upstream 14197 30884790 ~ 30885010 (+)
G596131 NA non-coding upstream 20524 30878290 ~ 30878683 (+)
G596127 NA non-coding upstream 23000 30875920 ~ 30876207 (+)
G596163 NA non-coding downstream 977 30900496 ~ 30900944 (+)
G596165 NA non-coding downstream 2484 30902003 ~ 30902248 (+)
G596184 NA non-coding downstream 15730 30915249 ~ 30915450 (+)
G596207 NA non-coding downstream 36666 30936185 ~ 30936449 (+)
G596197 NA non-coding downstream 90353 30989872 ~ 30992267 (+)
G593774 LOC106593940 other upstream 866586 30031959 ~ 30032621 (+)
G593513 LOC106610831 other upstream 1370297 29528027 ~ 29528910 (+)
LOC110527619 LOC106578599 other upstream 1535856 29329584 ~ 29503787 (+)
G593283 NA other upstream 1834615 29059698 ~ 29064592 (+)
G593171 NA other upstream 2006782 28892163 ~ 28892425 (+)
G596168 NA other downstream 3660 30903179 ~ 30903887 (+)
G596297 NA other downstream 182202 31081721 ~ 31082290 (+)
G599004 NA other downstream 2336294 33235813 ~ 33236636 (+)
G599123 NA other downstream 2391007 33290526 ~ 33295528 (+)

Expression


Co-expression Network