Gene
RNA
| Item | Value |
|---|---|
| gene id | G599180 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 33382054 ~ 33382312 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU682575 | True | 259 | lncRNA | 0.34 | 1 | 33382054 | 33382312 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528943 | NA | coding | upstream | 84978 | 33291706 ~ 33297076 (+) |
| sdc4 | LOC106582650 | coding | upstream | 166142 | 33205314 ~ 33215912 (+) |
| map1lc3a | map1lc3a | coding | upstream | 502312 | 32848895 ~ 32879742 (+) |
| unm_sa1614 | LOC108424671 | coding | upstream | 619438 | 32649541 ~ 32765702 (+) |
| fer1l4 | LOC106582641 | coding | upstream | 761435 | 32520230 ~ 32620619 (+) |
| LOC110527673 | LOC106582652 | coding | downstream | 117108 | 33499420 ~ 33562457 (+) |
| or134-1 | LOC106582596 | coding | downstream | 212912 | 33595224 ~ 33596343 (+) |
| LOC110528945 | LOC106582597 | coding | downstream | 233877 | 33616189 ~ 33617281 (+) |
| LOC110528946 | LOC106582609 | coding | downstream | 240925 | 33623237 ~ 33624475 (+) |
| si:dkey-43k4.5 | LOC106582653 | coding | downstream | 268325 | 33650637 ~ 33654546 (+) |
| G599177 | NA | non-coding | upstream | 3123 | 33378719 ~ 33378931 (+) |
| G599171 | NA | non-coding | upstream | 9775 | 33372039 ~ 33372279 (+) |
| G599164 | NA | non-coding | upstream | 17683 | 33364131 ~ 33364371 (+) |
| G599163 | NA | non-coding | upstream | 19348 | 33362356 ~ 33362706 (+) |
| G599098 | oser1 | non-coding | upstream | 19886 | 33344847 ~ 33362168 (+) |
| G599332 | NA | non-coding | downstream | 220860 | 33603172 ~ 33603497 (+) |
| G599376 | NA | non-coding | downstream | 282392 | 33664704 ~ 33665016 (+) |
| G599379 | NA | non-coding | downstream | 285751 | 33668063 ~ 33668343 (+) |
| G599326 | NA | non-coding | downstream | 292461 | 33674773 ~ 33675146 (+) |
| G599328 | NA | non-coding | downstream | 293891 | 33676203 ~ 33677214 (+) |
| G599123 | NA | other | upstream | 86526 | 33290526 ~ 33295528 (+) |
| G599004 | NA | other | upstream | 145418 | 33235813 ~ 33236636 (+) |
| LOC110531742 | LOC106594194 | other | upstream | 1372124 | 32007023 ~ 32013203 (+) |
| G596297 | NA | other | upstream | 2299764 | 31081721 ~ 31082290 (+) |
| G596168 | NA | other | upstream | 2478167 | 30903179 ~ 30903887 (+) |
| G600013 | NA | other | downstream | 583977 | 33966289 ~ 33966755 (+) |
| G600431 | NA | other | downstream | 1377035 | 34759347 ~ 34759658 (+) |
| G600531 | NA | other | downstream | 1588816 | 34971128 ~ 34971405 (+) |
| LOC110527686 | LOC106582662 | other | downstream | 3191575 | 36573811 ~ 36582978 (+) |
| G602295 | gli1 | other | downstream | 3707312 | 37089624 ~ 37090756 (+) |
