G647460 (LOC106565219)


Basic Information

Item Value
gene id G647460
gene name LOC106565219
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 74825011 ~ 74827149 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU735858
tctGATAGAATATTAAAAGGTATTGAATGCTGCACTGAATGCAGCAGGACATTGAAATTACTCATCTGGAATAAAGGACACAGTGGAATGTCACTTCAGGGTCCTTCGTTAGTCCTATACAGGCATGATAATTTTCCTTAAACAATAATTCAACCCAAACATGATTATACCCGAACACAACCAAGCCCAACCTCTTCCTTCTGTTCTCTCTTATGAAAGAGCAACGAGTAAACAATTTCAATAGGCTGACTTTCTTCACGACATCATCCCTCGCTTTCTTGTACAGGTCTGACCCTTCATGTTGAGTGTTTTATCTTGAATGAGGTTGTGGTGCATCAATGCAGGCAGAGTTAGAATAGACCTGACCAGATGACAAGGAGATATGACTAGCACTGGGAAACATGTCTAACGAAAGAAGGGTGGAATGATAAGCATTTAAGCAATGAAGGTAACATACAACCCATCAAAAACATTACATTAATAGAATAGAAGAGAGTCCATTACAATGTGGTTTTCCAACACAGCTCCTGGATAGAAGGTGCAGTTCTTTACAGAGGCGGTGCTGGTGTGAGGCAAGAAGAGGTACTTGGCTGGTATGTAGTGCTGAATGCTTTTTGGGGGGAGTGGGCCACACATACAAAGGCGTTCAATGCATCTCAAGAGTCTAATATTGCTTCCTTTCACCTTGTCACCTTTCCTGGAATGGATTAGAGTAAAGCAATATTCCGATCACTGGGAATTTCAGAAAGGATCCAGAGAGGAAGCCACTACAGACTTATTGAGATGCACTTAGCTGAGATACACTCCTCAATGGATAATCACCATTGACTATAAAAGAGAAGTCCATTCCATCTAAAAAGCACTGTGTGTGCGGGCCACAAAGCAGTTGTCTCTCCCTACATGTCGTCCTTGTCCTTAGCTCCGTGTTTGAGGATGCGGGTGAACTCGGCGTAGTTGAAGTTGCCCTTCGTGTCAATAGGCGCCTCACGGAACAGCTCGTCCACTTCCTCATCAGTGAAGCGGTCGCCCATTGTGGTCAGTAACTCTCGCAGGTGGTCCTCGTGGATCACTCCAGAGCCCTCTTCGTCGAAGCAGGCGAAGGCGTTGCGGATAACGTCCTCTGGGTCGGTGCCGTTGAGGCGCTCTCCGAACATGGTGAGAAACATGGTGAAGTTGATGGGCCCCGGCGCCTCCGCCATCATCCCCTCCAGGTACTCATCTGACGGGTTCTTACCTGGGGACCACAACAGAACACTCACACCATAGTCAACATTAAGTGGTAAAATCTGAATTCTGTTCGAAGGTAGACATTGAGGAAATATAAATATTATGGTTCCATTGAACCAATGTTAAATTGACTTATGTGCCCGGTTGGACGTTATTACCGGTCTGCATGCTTATTGGTAGCGCTCTATCTGACAGTACTGGTATTTAACTGGGAAATGTTCTGTTGCTATACATCTCTAAGGTTGTTtttggggaagatgtttcagtcTAGAATTGATGAGTATACGCTTGTTAGGTCTTGTATATAGAATATAGTCAACCCACTAACAACAGGTTCCTATGTGTTCCCCTTTGGCCTATGTCTTACCCAGTGAGGCCAGCATGTCATGAAGATCCTCCTTGTCGATGAAGCCGTCTCGGTTCTGGTCGATCATGTTGAAGGCCTCCTTGAACTCCTGGATCTGAGACTGGTCGAACATGGCGAACACGTTGGACGTGGCCCTCTGGGGCCGCTTCTTGGTGGTCTTCCCCTTTGCACGTTTGCTCGACATGGTGGTGGTTGGATGGGCCTAAGGCATGCAAAATAGGATATGGATGGTTACGGTTGGGTGAACGATACGACTCCCCAAAGTGGGCTGTTGTAT

Function

NR:

description
myosin regulatory light polypeptide 9-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU735858 True 1871 lncRNA 0.46 2 74825011 74827149

Neighbor

gene id symbol gene type direction distance location
LOC110528480 LOC106583597 coding downstream 11649 74788801 ~ 74813362 (-)
trim107 LOC106583598 coding downstream 37634 74777397 ~ 74787377 (-)
LOC110528477 LOC107582337 coding downstream 54790 74758711 ~ 74770221 (-)
LOC118965317 NA coding downstream 71377 74748533 ~ 74753634 (-)
LOC110527147 NA coding downstream 220822 74602280 ~ 74604189 (-)
LOC110528482 LOC106583600 coding upstream 2550 74829699 ~ 74837226 (-)
LOC110528483 LOC106583601 coding upstream 18327 74845476 ~ 75055731 (-)
LOC110528488 NA coding upstream 279864 75106897 ~ 75107924 (-)
LOC110528489 LOC106583603 coding upstream 449632 75276781 ~ 75314879 (-)
LOC110527148 LOC106583596 coding upstream 564555 75391704 ~ 75392659 (-)
G647500 NA non-coding downstream 9984 74814765 ~ 74815027 (-)
G647499 NA non-coding downstream 10256 74814540 ~ 74814755 (-)
G647489 NA non-coding downstream 53544 74771144 ~ 74771467 (-)
G647481 NA non-coding downstream 84315 74740492 ~ 74740696 (-)
G647099 NA non-coding downstream 196899 74627902 ~ 74628112 (-)
G647463 NA non-coding upstream 10838 74837987 ~ 74840905 (-)
G647534 NA non-coding upstream 65806 74892955 ~ 74937768 (-)
G647549 NA non-coding upstream 93727 74920876 ~ 74923177 (-)
G647715 NA non-coding upstream 313259 75140408 ~ 75140617 (-)
G646073 NA other downstream 1013554 73810902 ~ 73811457 (-)
G645928 NA other downstream 1130086 73694573 ~ 73694925 (-)
gnrh2 gon2 other downstream 1614587 73207930 ~ 73210424 (-)
G645156 NA other downstream 2106562 72717746 ~ 72718449 (-)
G645145 NA other downstream 2121289 72700709 ~ 72703722 (-)
G649025 NA other upstream 792176 75619325 ~ 75623983 (-)
G649327 LOC106583642 other upstream 1387552 76214701 ~ 76220931 (-)
G649684 LOC100136508 other upstream 2186279 77009249 ~ 77016601 (-)
LOC110529034 LOC106583646 other upstream 2555518 77380754 ~ 77390369 (-)

Expression


Co-expression Network