XLOC_002581 (si:ch73-340n8.4)


Basic Information

Item Value
gene id XLOC_002581
gene name si:ch73-340n8.4
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 7769814 ~ 7772434 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004800
GGGGGCAGCATAGCAAGTCCGAAGATGAGTGTGTTGTAGCGAAGTAAGAAGTCTGCAAAACACATACGGAAATGGAAACGAACGGAGCTAAAATGCCCTTCGCGAGTGGtgaattgtttaaaatattgaaaGTTTCGATAAaaaggaggaggaagagaaggAGGAACGGAGCGAAGCCCGTGGCACCGAAGCCCGTGCCACCGAAGCCCGTGGTGGATCCCGTAACTCGCGCCGGCCTCGTGTTTCCCGTCCGACAGTTTCAGCACACATTCCCGCAGAGGCTGGACGAGGAAGCCGCGGTGTTTTTCACCGGAGTGATGGAGTTTCTCGTGGCTGAGATCTTAGCTTTGGCAGGAGAAGATGCTGCACTCCAGCAGTCAAATAAGATCACGATACATCACATTCCTGGACTTCAGGacagaaaaaaatatgcaaagtTGGCGAGAATAACGTTACCGTTACCCAAATTTACAACTAAAGTTAACGTTATCAAAAAAAGACTTCCGAGAAAACCGAGAGTGGGACCTCCAAGAAGTTATTTAAGACTCCTGACTGAGTGATGCACGGATATTTACTAAATCTTCAGCGCTGTACTTTTTTTCTAAGGACACTGTACGGTGCACTTACGGTGTGTCGTCACCTTTTGCTTGTCATAGCTCGTCTCAGTGCACTGCTTTAACTATCATTTGTGCTTGTTTATAGGCTTTGCCATTCATACGGTTTTACGCAATCACATTTGTTGGAAATAAACGTTGTAAGTGACATTGGCATCGTTTAAAAATGCATCTGCACACTCTCACACACGAATTGCTCAAAATCTACTTTTTTTGGCTACGTTTTTTGCCATTAACTACACCTGGTCCATATgcaacattaaaatacatttacctGGTTTATCATTTGATATTTATCGTTATTAATGTGTATTTGTTGACCAATGTATCAATTTTATATCTAAGACTTTTTCTAAGACTGTTAAAATAGGCCTTATATTCTTCAAGACCGAACTTGATTTagagtattttatttttgtaatgattTCAAATATCATCCTGCCTTATCATCgttttatacaattaaaaaatatataataataaataattaatttaattatatataataattaaaaaataaataatttgttcacATACTAGGCCTATATAATCTGAGATTTCAAACAATTCTATCCAAATGCTGTATCATCTCTAAAATAGATAAGCTACAGTAGGCTAAACTGATTATTATCTGAATTTCAGATCACAAAAGTTAATAAACtactaaaaataaagtttcaagcCAGGTGTTTTACAGTAATGccacagaaaaaaattattagttcCCAGCAAACCTTTcagaaaacagttttaaaaagagcTGGTTTGTTAGTGTGTAGAACAACTTTATAATTACTTCTGTTTTCAAGAAAATCAAGTCCTCTTTGTGAAGTCGAAAGGTTTATGCTACCATCATTGCAAACCTGAAATACTATAACTACAGAAATCTACCAACAGGTGGCGTTAGAACTGCATTCTACCTTTCAAAGTGGCTGTGACTTCAGAATAGCATATAAACACATGACTTGCAGCATGTGTAGCCTACTGTGAAAAGTAAACAGTTGAATGAGCaataaaattgttttttgtttaatgagATATAAATAAATCTGCTATTTTAAGCATCTCCTACATTCATTTTTTGACTGCATGCCTTTAAAACGTTATTAATTAAAACTGATAAGAAAAATAACTGGAAGATATTTGCAGACTAATGATTATGAATCATtagacatttattattaatatttccttGCCCATATAAAAAGACACTGGGTCTGTATGTGCTAATTTTCAGATTTATCACTCTTTTAATAGTTCCTTTTATGTAATATTTGAATTTACAACTCTGCTTTGGTAAATTGACTTGAGAGTCGTATTGCTTATAAAACATGGGCCTAATTGTTCTTTCACGATATGAAATCGTCCCCATTGTCCATATTTGTATTTTTAGCCACTCAGACTAAACTCTCttttctgctgctgctttcaatcAGACAGCCTTCAAAATCACTCTATTAAGAGAGAGAAAATGATGAAAACAAGGGCAGACTACAAAACCACTGATGTTCAGAAGAATGTCTGTGGAAATCGAGTGTTTAGCCAAGAAGTCTGGCTTAACCTTGAATTCTTCTTTTGTCACCACCAATGATAACATTGTGGTTTACTCTTAGCCTCCACTGCTTGGGATTTATAAAGTGGGAATTTAAAAATGACCCAGAGGGAATGACAGAAATGTTTAGAATGGAGAAGGGAAGACGTTACTACTACGTGTTCTGCgaaaggagagagagaaagagagagagatgatcCACCCCTTGTTCACTTTCAATGAATTCTCTCCCGATCCAGCCTACGCACGTGCAGAGTGCCACGTAGGCCAGTGTGGACAATACCAGTTACGGCTTCGCTCCTTTGCTCTCTGAGTAATGGAAACCTGCTGGTTTTGCATGGGGGAATCATCTGAAACAAGCTGTGCCAGAATACTATAGTTTATTTCTACATGTTCTATAGATGTGTTGTGTAAGAGAATTTACAATTTTGCTTTAAAACCTATTAAAACTAGAC

Function

symbol description
si:ch73-340n8.4 Predicted to enable protein heterodimerization activity.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000098338

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004800 True 2621 mRNA 0.37 1 7769814 7772434

Neighbor

gene id symbol gene type direction distance location
XLOC_002580 loxa coding downstream 12938 7738540 ~ 7756876 (-)
XLOC_002579 snx24 coding downstream 34875 7727281 ~ 7734939 (-)
XLOC_002578 gmcl1 coding downstream 67785 7673446 ~ 7702029 (-)
XLOC_002577 pcyox1 coding downstream 98595 7653184 ~ 7671219 (-)
XLOC_002576 ubxn8 coding downstream 133474 7623698 ~ 7636340 (-)
XLOC_002582 mpx coding upstream 6436 7778870 ~ 7785945 (-)
XLOC_002583 mat2aa coding upstream 38021 7810455 ~ 7821686 (-)
XLOC_002584 inpp5ja coding upstream 59005 7831439 ~ 7858553 (-)
XLOC_002585 BX294661.1 coding upstream 98193 7870627 ~ 7892684 (-)
XLOC_002586 NA coding upstream 111319 7883753 ~ 7886040 (-)
XLOC_002575 BX537303.2 non-coding downstream 257691 7512008 ~ 7512123 (-)
XLOC_002572 NA non-coding downstream 515916 7238244 ~ 7253898 (-)
XLOC_002571 NA non-coding downstream 708277 7050325 ~ 7061537 (-)
XLOC_002570 CABZ01061993.1 non-coding downstream 760324 7009374 ~ 7009490 (-)
XLOC_002566 BX511100.4 non-coding downstream 1042700 6725657 ~ 6727114 (-)
XLOC_002590 NA non-coding upstream 208685 7981119 ~ 7983744 (-)
XLOC_002602 NA non-coding upstream 846284 8618718 ~ 8621543 (-)
XLOC_002603 NA non-coding upstream 866487 8638921 ~ 8657677 (-)

Expression


Co-expression Network