XLOC_002583 (mat2aa)


Basic Information

Item Value
gene id XLOC_002583
gene name mat2aa
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 7810455 ~ 7821686 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004804
TTGCCGTTGTAGGGCCCTGGCGTCCTTTCTTATTGGCTTAATGGAAGACGGACGGGGGCGCGCCCGAGTGACGCTTGAGTTTGGAGTGAAGTAGGAGGGATAAAACCTTGAAGACCGGCTGGCGTGAGCATTTGAGGTCAAGTCTACGCAGCGTGTTCGAGACAGAGAAACATCAGAAACATCTATTTAACACCGACGTTAGAAAAGCAGAAACTGACACGCTAGACCGGCGAAACAAACCCGATTAGAAACAGATTTAGAAGAGCGTAACAATACAATCAATATGAACGGACAACTGAACGGCTTTCACAACTCTCTGATTGATGAAGACTGCTTTTTGTTCACGTCGGAGTCTGTCGGCGAAGGACACCCTGACAAGATTTGTGACCAGATCAGTGACGCTGTGTTGGACGCCCACCTCAAACAGGATCCTGATGCCAAAGTAGCATGTGAGACTGTCGCCAAGACTGGAATGATCTTGCTGGCCGGAGAGATCACTTCTCATGCTGTAGTGGACTATCAGAAGGTAGTCAGGGACACCATCAAGCACATTGGCTATGATGACTCTTCTAAAGGGTTTGACTACAAGACCTGCAATGTGCTTGTGGCTCTTGAGCAGCAGTCACCTGATATTGCTCAAGGGGTTCACCTTGACCGCAATGAGGAGGATGTTGGAGCTGGAGACCAGGGTTTGATGTTTGGTTATGCCACTGACGAGACTGAGGAGTGCATGCCTCTCACTATTGTCCTGGCTCACAAGCTGAACGCTAAAATGGCGGAGCTGCGCCGCAACGGCACTCTGCCTTGGTTGCGACCTGACTCCAAGACCCAGGTGACTGTCCAGTACAGGCAGGACCGCGGTGCCATGCTTCCGGTTCGTGTGCACACCATTGTAGTGTCTGTTCAGCATGATGATGTAGTCTGTCTGGATGAGATGCGTGATGCTCTGAAGGAGAAGGTGGTGAAGGCTGTGGTGCCGAATGTCTACCTGGATGATGACACCATCTATCATCTGCAGCCCAGCGGCCGCTTTGTCATCGGAGGCCCACAGGGAGATGCTGGTTTGACTGGCCGTAAGATCATCGTGGACACTTATGGAGGCTGGGGTGCTCATGGAGGTGGTGCATTCTCTGGAAAAGACTATACTAAAGTTGACCGTTCAGCTGCTTATGCAGCCCGATGGGTGGCCAAGTCTCTTGTGAAGGCTGGATTGTGCAAACGCGTCCTGGTCCAGGTGTCTTATGCCATTGGAGTGGCCCACCCCTTGTCCGTCTCCATCTTCCACTATGGGACCTCCCAGAGGAGTGAGAAGGAGCTGCTGGAGATCGTGAAGAAGAACTTTGACCTCCGTCCCGGCGTCATCGTCAGAGAGCTGGACCTGAAGAAGCCCATCTACCAGCGCACCGCCGCCTATGGCCACTTTGGCCGCGAGTCCTTCCCCTGGGAAGTACCCAAAAAGCTTAAATACTAAATCTGTAACCCCCCCTCCTTTCCTTGGGCAGTAGGTGTACATTACAGAGAAACCTACTCAACCCACTGGAGGGGGGAGAAGTACCAAAACCCCTCTCTCCTTACCTCACATTCACCCCATTCCCAAAGGTAATTCCCCCCTCAACGGCGCTGTCCCAATGCCGCTCTACCTTCAGTCCTGTTCTTTGCTGTATTGTTTTCGAATGATCTGTGGATGGTGGCTGTTTGGTTTTTGTTCAGTTTGACTTTATGCACCCTCTTGCCCACCTGTCTCTCTTCGGCCCTTTTTTCCTTACCTACTTGCTTGAATGATCAAGTAACGGCACAAATGGGGGTCAAAGGTTGTTCTGTGATGCTATGCATTACTAGCTGA
>TCONS_00004805
GGCCAAGTCTCTTGTGAAGGCTGGATTGTGCAAACGCGTCCTGGTCCAGGTGTCTTATGCCATTGGAGTGGCCCACCCCTTGTCCGTCTCCATCTTCCACTATGGGACCTCCCAGAGGAGTGAGAAGGAGCTGCTGGAGATCGTGAAGAAGAACTTTGACCTCCGTCCCGGCGTCATCGTCAGGTAAAATGTGCTCCTCGGGTGGCCCAACCTCTGCCTCTTGGTTTGACGATTTTTCCCATGAATTGTGGGATTTGCTCCCGAGTTGTTTCCAGAGTTAGTCTCTGCAGTTAATGTTAGTGAGGCTCGTTGAGTTTGACTGAACGTCCTCCTTTCTCTTTGGCAATTGTCTCACTCTGTCTCCTGTACAATTCCAGAGAGCTGGACCTGAAGAAGCCCATCTACCAGCGCACCGCCGCCTATGGCCACTTTGGCCGCGAGTCCTTCCCCTGGGAAGTACCCAAAAAGCTTAAATACTAAATCTGTAACCCCCCCTCCTTTCCTTGGGCAGTAGGTGTACATTACAGAGAAACCTACTCAACCCACTGGAGGGGGGAGAAGTACCAAAACCCCTCTCTCCTTACCTCACATTCACCCCATTCCCAAAGGTAATTCCCCCCTCAACGGCGCTGTCCCAATGCCG
>TCONS_00004806
gcagaattatatatttttttgtataagtATGTTTTTTACATCTATTTTTAAATACGTTTTATCAATGTTTATTACAGTTAGTTTAATAATTTATGTAGTtttagtgctttttaaaatggcAACCAactgacttttattattattattattattattattattattattattgatttttgttAAAGCCTTTTTGTAAAAGCAGCATGATACTTAAAGATACATGCTCTTATAGGGAGATGCTGGTTTGACTGGCCGTAAGATCATCGTGGACACTTATGGAGGCTGGGGTGCTCATGGAGGTGGTGCATTCTCTGGAAAAGACTATACTAAAGTTGACCGTTCAGCTGCTTATGCAGCCCGATGGGTGGCCAAGTCTCTTGTGAAGGCTGGATTGTGCAAACGCGTCCTGGTCCAGGTGTCTTATGCCATTGGAGTGGCCCACCCCTTGTCCGTCTCCATCTTCCACTATGGGACCTCCCAGAGGAGTGAGAAGGAGCTGCTGGAGATCGTGAAGAAGAACTTTGACCTCCGTCCCGGCGTCATCGTCAGAGAGCTGGACCTGAAGAAGCCCATCTACCAGCGCACCGCCGCCTATGGCCACTTTGGCCGCGAGTCCTTCCCCTGGGAAGTACCCAAAAAGCTTAAATACTAAATCTGTAACCCCCCCTCCTTTCCTTGGGCAGTAGGTGTACATTACAGAGAAACCTACTCAACCCACTGGAGGGGGGAGAAGTACCAAAACCCCTCTCTCCTTACCTCACATTCACCCCATTCCCAAAGGTAATTCCCCCCTCAACGGCGCTGTCCCAATGCCG
>TCONS_00004808
GGGACACATGAAGTCCGAACGCTGCTTTAACCATGGGCAGCTGTTCAGAAGACAGGGGCGTTCACGCAGCACGTGCTTTATTGCGGCGGTATGCGTGTATTTTGTTAAACAGTTGTATTGGACTACTGCGACGACCATCGTGCCATCTGCGCTGCGTTTATCCTGTACGTCAAAGGAGTACGCAGTAATCATAAAACCAGTGCGAGAACAAACCCACTGCGTCCGCTTCGGGTCTCAAGTATGCAGTTCATACTATCAGTTGTATAACAGCATACTTTTAGACGTGAAAAGAATTGAAAAGATACAAAAAGGTGAATGACTCCTGAAAATGTGAGAGCCGCAGGCACTAAGAAAGACAAGATTTGTGACCAGATCAGTGACGCTGTGTTGGACGCCCACCTCAAACAGGATCCTGATGCCAAAGTAGCATGTGAGACTGTCGCCAAGACTGGAATGATCTTGCTGGCCGGAGAGATCACTTCTCATGCTGTAGTGGACTATCAGAAGGTAGTCAGGGACACCATCAAGCACATTGGCTATGATGACTCTTCTAAAGGTAAAACACCAAGAAACATTAGGGGTGCTATTAAGTTATGGTTACATGACATTGGTAGCCAACAATGGAAATTTTTCTCTTTGCATATTTAAAGTTTCACATTTGCATGACATTTTGTGGGGGAAAAAAGCCCAAAACTTTATTTTACCAATGCCAGGTCATAATTTGACACTGTCATCTTGTTAGTAAATAGTACTTGTAGAGAAGTCATGACAGTCGTTCAGTAGTTTTTGTAATATGCTGTATAAGATGTCCCCATGGTTGGTTGTAATGTGATGTAAATCCACACTATGCTGATGAACCATTAGGAAagtgtttcccaactctgttcctgCAGGCACACcagtaatgcacattttaaagcttttCCTAATCTGAAACCTTTGAATCAACTCATAACATAAAAGAGATACAAAACCTGAACTTAATGG
>TCONS_00004807
TACGCAGCGTGTTCGAGACAGAGAAACATCAGAAACATCTATTTAACACCGACGTTAGAAAAGCAGAAACTGACACGCTAGACCGGCGAAACAAACCCGATTAGAAACAGATTTAGAAGAGCGTAACAATACAATCAATATGAACGGACAACTGAACGGCTTTCACAACTCTCTGATTGATGAAGACTGCTTTTTGTTCACGTCGGAGTCTGTCGGCGAAGGACACCCTGACAAGATTTGTGACCAGATCAGTGACGCTGTGTTGGACGCCCACCTCAAACAGGATCCTGATGCCAAAGTAGCATGTGAGACTGTCGCCAAGACTGGAATGATCTTGCTGGCCGGAGAGATCACTTCTCATGCTGTAGTGGACTATCAGAAGGTAGTCAGGGACACCATCAAGCACATTGGCTATGATGACTCTTCTAAAGGTAAAACACCAAGAAACATTAGGGGTGCTATTAAGTTATGGTTACATGACATTGGTAGCCAACAATGGAAATTTTTCTCTTTGCATATTTAAAGTTTCACATTTGCATGACATTTTGTGGGGGAAAAAAGCCCAAAACTTTATTTTACCAATGCCAGGTCATAATTTGACACTGTCATCTTGTTAGTAAATAGTACTTGTAGAGAAGTCATGACAGTCGTTCAGTAGTTTTTGTAATATGCTGTATAAGATGTCCCCATGGTTGGTTGTAATGTGATGTAAATCCACACTATGCTGATGAACCATTAGGAAagtgtttcccaactctgttcctgCAGGCACACcagtaatgcacattttaaagcttttCCTAATCTGAAACCTTTGAATCAACTCATAACATAAAAGAGATACAAAACCTGAACTTAATGG

Function

symbol description
mat2aa Predicted to enable methionine adenosyltransferase activity. Acts upstream of or within cardiac muscle cell development. Predicted to be part of methionine adenosyltransferase complex. Predicted to be active in cytosol. Is expressed in anterior neural tube; epiphysis; heart; optic cup; and somite. Orthologous to human MAT2A (methionine adenosyltransferase 2A).

GO:

id name namespace
GO:0072359 circulatory system development biological_process
GO:0055013 cardiac muscle cell development biological_process
GO:0006730 one-carbon metabolic process biological_process
GO:0006556 S-adenosylmethionine biosynthetic process biological_process
GO:0005829 cytosol cellular_component
GO:0048269 methionine adenosyltransferase complex cellular_component
GO:0004478 methionine adenosyltransferase activity molecular_function
GO:0016740 transferase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0000166 nucleotide binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-2049 Predicted to enable methionine adenosyltransferase activity. Acts upstream of or within cardiac muscle cell development. Predicted to be part of methionine adenosyltransferase complex. Predicted to be active in cytosol. Is expressed in anterior neural tube; epiphysis; heart; optic cup; and somite. Orthologous to human MAT2A (methionine adenosyltransferase 2A).

Ensembl:

ensembl_id ENSDARG00000040334

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004804 False 1843 mRNA 0.52 9 7810455 7821686
TCONS_00004805 False 643 lncRNA 0.53 2 7810664 7811388
TCONS_00004806 False 815 lncRNA 0.45 3 7810664 7811754
TCONS_00004808 False 987 lncRNA 0.42 3 7814644 7820475
TCONS_00004807 True 862 lncRNA 0.41 3 7814644 7821542

Neighbor

gene id symbol gene type direction distance location
XLOC_002582 mpx coding downstream 24510 7778870 ~ 7785945 (-)
XLOC_002581 si:ch73-340n8.4 coding downstream 38021 7769814 ~ 7772434 (-)
XLOC_002580 loxa coding downstream 53579 7738540 ~ 7756876 (-)
XLOC_002579 snx24 coding downstream 75516 7727281 ~ 7734939 (-)
XLOC_002578 gmcl1 coding downstream 108426 7673446 ~ 7702029 (-)
XLOC_002584 inpp5ja coding upstream 9753 7831439 ~ 7858553 (-)
XLOC_002585 BX294661.1 coding upstream 48941 7870627 ~ 7892684 (-)
XLOC_002586 NA coding upstream 62067 7883753 ~ 7886040 (-)
XLOC_002587 slc35e4 coding upstream 79326 7901012 ~ 7913591 (-)
XLOC_002588 osbp2 coding upstream 95034 7916720 ~ 7974155 (-)
XLOC_002575 BX537303.2 non-coding downstream 298332 7512008 ~ 7512123 (-)
XLOC_002572 NA non-coding downstream 556557 7238244 ~ 7253898 (-)
XLOC_002571 NA non-coding downstream 748918 7050325 ~ 7061537 (-)
XLOC_002570 CABZ01061993.1 non-coding downstream 800965 7009374 ~ 7009490 (-)
XLOC_002566 BX511100.4 non-coding downstream 1083341 6725657 ~ 6727114 (-)
XLOC_002590 NA non-coding upstream 159433 7981119 ~ 7983744 (-)
XLOC_002602 NA non-coding upstream 797032 8618718 ~ 8621543 (-)
XLOC_002603 NA non-coding upstream 817235 8638921 ~ 8657677 (-)

Expression


Co-expression Network