XLOC_002603


Basic Information

Item Value
gene id XLOC_002603
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 8638921 ~ 8657677 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005998
CTAATTCTTTTATTACATTcagaaaacatcataaaatacatCAGAAAGTTTCAAAGTAGCCAAAGTAAACCATAAGGTAGCATAAATTAACCACACCATAAAGATTTTCATTGTGGTCACATGATACCATTACAGGTGGTCAACCAATTAACCATTTACATGTCACAAACagcatatattataataaaaactaaataagcgAAGCATAtacgttttatattttaaaaccagACGAACCCCAATACATTTAGCTACATTAAGCGACTTCAATAAACATTCATAAATGcgtttaaaaaatctatattcaTGTGATATAACTGAAAATTAGGCCtatcaaaaatgaaaataggttctcagaccacacacacacacacaaaaaaaaaaaaactggacccAAAATGTATCTGGCCACTTCATGCTTTAAGATGGCTGAATTTCCTTAaggactttcactttcatttaagCTCCTGTTTTGTGACTATTAGTTTTCCAACTGATCGAATGATGTCGGTTTCCAGTCCTTGGATATCAGAGATATTCCCTTATTATATTAGGAGCATAAACCAGGGCATTTATTTCACACCATCCCCATTTAAAGTTCATTGAGATCCTGAGTAATTGGGAAGTGCAGTGGGTTGTAAGCACTCGCTTCTTCCTGTTGACAAAGTTCACAATCCCTCAAAGAAGCAGATAAACACGGCTCAAAACAGCCTAGAGATGGGCCTAGGTGTTTTTATGTCCACAGCAGCCATCCTATCCGAGTATTTCACCTTGGGAGAAACTCCTAGTTcgactttttgttgttgttgttgttgttgttgctggcgGCGGCCACTACTCGCCGCGCGCCTTCAGAAACAGATCCTCTTCAGTTGTTGGATGCGTATTGGATCAGTGTAACATAGCAGAAACTTTTAGTTTCACGTTGAGGCTTGTCTTCCCCTATGAGGCTCCTCAAATAAGGAAGTTTCTATTCTGGATGCTGATTGGCTGAGGTGATCGTCTACGCTTTCCTGTTGATGACCCCTGACCCACTTTCTG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005998 True 1041 lncRNA 0.38 3 8638921 8657677

Neighbor

gene id symbol gene type direction distance location
XLOC_002602 NA coding downstream 17378 8618718 ~ 8621543 (-)
XLOC_002601 tctn1 coding downstream 204105 8416117 ~ 8434816 (-)
XLOC_002600 csgalnact1a coding downstream 280525 8298984 ~ 8358396 (-)
XLOC_002599 plpp1a coding downstream 343579 8265972 ~ 8295342 (-)
XLOC_002598 dhx29 coding downstream 441872 8154874 ~ 8197049 (-)
XLOC_002604 GOLPH3 coding upstream 2977 8660654 ~ 8672820 (-)
XLOC_002605 BX571955.1 coding upstream 18213 8675890 ~ 8677828 (-)
XLOC_002606 NA coding upstream 184021 8841698 ~ 8858568 (-)
XLOC_002607 mocs2 coding upstream 289551 8947228 ~ 8957480 (-)
XLOC_002608 arl15b coding upstream 348897 9006574 ~ 9089636 (-)
XLOC_002590 NA non-coding downstream 655177 7981119 ~ 7983744 (-)
XLOC_002585 BX294661.1 non-coding downstream 746237 7870627 ~ 7892684 (-)
XLOC_002586 NA non-coding downstream 752881 7883753 ~ 7886040 (-)
XLOC_002575 BX537303.2 non-coding downstream 1126798 7512008 ~ 7512123 (-)
XLOC_002609 CU694950.1 non-coding upstream 359044 9016721 ~ 9016837 (-)
XLOC_002611 BX323017.1 non-coding upstream 483888 9141565 ~ 9141679 (-)
XLOC_002612 NA non-coding upstream 487831 9145508 ~ 9146642 (-)

Expression


Co-expression Network