LOC110531561 (LOC106578014)


Basic Information

Item Value
gene id LOC110531561
gene name LOC106578014
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 14449856 ~ 14458737 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021614797.2
CACGTATGATAAGGTGTGGAGGGACATGTTGAAAGATGAGGGAACACGACACACCCCCTTCCCTTTACTCTGCTACAGCATGCTACTGCAAGCATGACAGATCAGTGAAAAtacagagttagagagagagagagatagagaggaagagggatagagagaaagagggatcgAGAGGAGAGAACacgtggagtgaaagaggagtaCTGAGAAAAGTAGGAAGAATATATACACCATCAAGACTAGAAGAAATGAAATAAAGGAAGTCTGTCCCTgcctcttctccatctctttctctatcccagGAATAGGACTATTTGATCATTGCCATGGCCCACAACCAAACCATCCCCCaaatcatccctccatccctcacaaAACCCCCCTTGTCCCTTTCTCCGTTCTCCTCCACTACGCCCCCCTCCCTGTTCCTTTCAGCCTCCAACCACGTCCTTAACACCACCATGTCTGTTTTCGCGACGAACCAAAGCATTGTGGGTAATACCACCTCCACAACCGTAGGGGCACTCATCCTGGGTCTGGTGTTTCTCCTTGGCGTCCCCGGCAACCTCTTCATCATCTGGAGTATCCTGGCACGCGCCCGCCGTCGCTCTGTCACCACCCTCCTCATCCTCAATCTGGCAGTGGCCGACGGCTCGCTCATGGCGCTCACGCCGTTCTTCATCGTGTACCTTGTGAAGAAGACATGGATTTTTGGCGATATCATGTGCAAGATACTCTTCTACCTGTGCCTGGCCAACATGTACGCCTCCATCCAACTGATCATGCTGATGAGCCTGCACAGGCTGGTGGCCGTGGTGTGGCCGCGGCGTGTTGCTGCCCTCGCTGGCCGGAAGGCAGTACTGCGGGCGGTGCTGGTACTGTGGATCCTGGTGCTGGTCTCATCCATCCCCGCGTTGCTGTTCAGGCACAAACTGACGGCCACGTACCCCAACGGGAGGAGCCGTATGGTGTGTGAGTCATTTCACAAGAAGCAGAGTCAAGTGGTGCTCCAGTACACGTTGGAGACGGTGCTGGGATTTGTAGTTCCTTACGGGTTGATTGTAGGCAGCTACATCTGCATCCTGCGGAGGATCAGACAAACCAGgtTCAGGAGGAGGATCCACAGTGAGAAACTCATCCTAACCATCGTGGTCACCTTTGGAATCTTCTGGCTGCCCTACCATGTCATCAACATTGtgcagGTTGCCGCAGCACTTTCTCCTCAAGATTCAGCTATAAAAGCAAGACTGGACCCTATCTGGCAGTCCTGCCGTGCGGTCACATCAGCCCTGGCATTCATCAGCAGCTGTGCCAACCCGGTCCTCTACACCTTCGCCGGCAAGTCCTATATCCGGCGGGAAGGCTTTGCCTTCATGGCCCGTCTGTTCGAGGGCACTGCGCTGGACTCTGGGACCAGGAAGAACCGACAGAACAGCCAGAAcagccgagagagagacagggatgcagaGGGGCTGAAAGAAAAGGAAGGAGAGCTAGAATCCACGACCAGCGCCAATGTTGTGAGCCCCATCTGTGTGAAACCTGTGAAAAATGTCAAATAGTGACCCTCTGGGCTGGTAGTTGGACGCTATGGTGGCAGAACCTATTTTGATGGGAAAACACTGCCTAAGACTGGTTTCCTGCAGTTCGCTCGGCGGCCACTAGATGTAAGTTTTTCCTAATTGGTCatgactgacttactgactggACCATATCTCTGTTTTTAGAGGTTGTGCTTCAAGCTCAGCAGGTGAGGGGGGTGAATTTTATAAGTGATCTTACCGGGATGtcttgtctgtctctgactgcctctctttatatatatgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg

Function

NR:

description
leukotriene B4 receptor 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021614797.2 True 1912 mRNA 0.52 7 14449856 14458737

Neighbor

gene id symbol gene type direction distance location
LOC110531560 LOC106578013 coding downstream 3217 14442483 ~ 14446639 (-)
LOC110531554 LOC106578008 coding downstream 44804 14311455 ~ 14405052 (-)
LOC110531552 LOC106577828 coding downstream 138709 14294361 ~ 14311147 (-)
si:ch211-63p21.8 LOC106577827 coding downstream 162687 14282805 ~ 14287169 (-)
LOC110532998 NA coding downstream 190637 14255479 ~ 14259219 (-)
LOC110532933 LOC106578015 coding upstream 26003 14484740 ~ 14508334 (-)
LOC110531562 NA coding upstream 30228 14488965 ~ 14490565 (-)
LOC110531564 LOC106578016 coding upstream 50303 14509040 ~ 14531504 (-)
LOC110531563 LOC106578017 coding upstream 73257 14531994 ~ 14626815 (-)
LOC110531585 LOC106608993 coding upstream 175188 14633925 ~ 14646754 (-)
G774332 NA non-coding downstream 15276 14434342 ~ 14434580 (-)
G774331 NA non-coding downstream 17220 14432423 ~ 14432636 (-)
G774317 NA non-coding downstream 36942 14412638 ~ 14412914 (-)
G774316 NA non-coding downstream 38302 14411346 ~ 14411554 (-)
G774314 NA non-coding downstream 41278 14408277 ~ 14408578 (-)
G774338 NA non-coding upstream 677 14459414 ~ 14459613 (-)
G774344 NA non-coding upstream 9189 14467926 ~ 14468220 (-)
G774345 NA non-coding upstream 9901 14468638 ~ 14473995 (-)
G774348 NA non-coding upstream 17791 14476528 ~ 14476767 (-)
G774351 NA non-coding upstream 23204 14481941 ~ 14482250 (-)
LOC118966145 LOC106599223 other downstream 195699 14249401 ~ 14254157 (-)
LOC110531538 NA other downstream 462274 13977459 ~ 13987582 (-)
G773168 NA other downstream 750528 13697179 ~ 13699328 (-)
G773163 NA other downstream 857768 13586326 ~ 13666937 (-)
G772877 LOC106577934 other downstream 1453446 12994269 ~ 12996410 (-)
G774427 LOC106578022 other upstream 265317 14724054 ~ 14724522 (-)
G774562 LOC106577809 other upstream 779321 15238058 ~ 15253973 (-)
G774702 LOC106577875 other upstream 893570 15352307 ~ 15361319 (-)
G774954 NA other upstream 1166465 15625202 ~ 15625920 (-)
LOC110531603 groa other upstream 1323620 15781909 ~ 15787666 (-)

Expression


Co-expression Network