Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118966205 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 57363432 ~ 57363486 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005053471.1 | True | 55 | mRNA | 0.38 | 1 | 57363432 | 57363486 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532457 | LOC106572399 | coding | upstream | 118730 | 57241333 ~ 57244702 (+) |
| mfsd4ab | mfsd4a | coding | upstream | 140154 | 57217995 ~ 57223278 (+) |
| nfascb | LOC106572405 | coding | upstream | 226522 | 57120186 ~ 57136910 (+) |
| LOC110531215 | uba3 | coding | upstream | 383529 | 56959048 ~ 56979903 (+) |
| LOC110531214 | lmod3 | coding | upstream | 413378 | 56948804 ~ 56950054 (+) |
| LOC110532463 | LOC106572391 | coding | downstream | 620703 | 57984189 ~ 58020592 (+) |
| apex2 | apex2 | coding | downstream | 922959 | 58286445 ~ 58290128 (+) |
| LOC110532471 | LOC106572384 | coding | downstream | 935287 | 58298773 ~ 58321350 (+) |
| LOC110532474 | LOC106572383 | coding | downstream | 958115 | 58321601 ~ 58331563 (+) |
| LOC110532475 | LOC106572379 | coding | downstream | 997287 | 58360773 ~ 58382911 (+) |
| G822983 | dcj11 | non-coding | upstream | 22228 | 57339393 ~ 57341204 (+) |
| G822960 | NA | non-coding | upstream | 85605 | 57276698 ~ 57277827 (+) |
| G822933 | NA | non-coding | upstream | 132680 | 57230404 ~ 57230752 (+) |
| G822866 | NA | non-coding | upstream | 193176 | 57169042 ~ 57170256 (+) |
| G822900 | NA | non-coding | upstream | 195077 | 57168138 ~ 57168355 (+) |
| G823125 | NA | non-coding | downstream | 207715 | 57571201 ~ 57571619 (+) |
| G823156 | NA | non-coding | downstream | 263415 | 57626901 ~ 57645625 (+) |
| G823202 | NA | non-coding | downstream | 348977 | 57712463 ~ 57713466 (+) |
| G823238 | NA | non-coding | downstream | 406913 | 57770399 ~ 57771483 (+) |
| G823260 | NA | non-coding | downstream | 439070 | 57802556 ~ 57839380 (+) |
| G822404 | NA | other | upstream | 599892 | 56762625 ~ 56763540 (+) |
| G822283 | NA | other | upstream | 790475 | 56572607 ~ 56572957 (+) |
| LOC110532427 | LOC106572343 | other | upstream | 1230496 | 56125754 ~ 56132936 (+) |
| LOC110532426 | NA | other | upstream | 1239247 | 56119005 ~ 56124213 (+) |
| G821409 | pacsin1 | other | upstream | 1299777 | 56061706 ~ 56063655 (+) |
| G823373 | NA | other | downstream | 665133 | 58028619 ~ 58028857 (+) |
| G823467 | NA | other | downstream | 841777 | 58205263 ~ 58244984 (+) |
| G823459 | LOC106572386 | other | downstream | 883628 | 58216176 ~ 58250307 (+) |
| LOC110532478 | LOC106572378 | other | downstream | 1025185 | 58385510 ~ 58390570 (+) |
| G823580 | LOC106567312 | other | downstream | 1155733 | 58519219 ~ 58535643 (+) |
