G800826


Basic Information

Item Value
gene id G800826
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 38050333 ~ 38055272 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU911416
GAAACTTTATTTATAACACAGGGGGCGCTGACGTGGAGTCGCCAACTCAGCATCTATATTACAAGGTTTATCTGCAAGGCTgcgtatgtactgtactgtatttggAAACCAAGATCGCAGTGGCACTAGAAACACACGCTTAAAACAACACACTCTTTCCCTTTTTTTTGTTCAAGTTTTTTTCCTCCCTTTTTTCATACAAAATGGTACAAACAACAATACAAAATAGTTGTGCTGTTGACAGTTTACAAAAAAAAGTATCTTACCTTGATAACTGTGCAATTATTCTTTcgggtttttttttatttttttaagcatTTTAGATTGTTTTCAATTTCATTTTTTTGTTCTCCATTTGAGTTTATGTGAGTATGGTACACACCAGAAGATCTTCTGGACCGCAACCTCGGTCATGCGGGCTGCTACACGCGTTAAAATGATCTTTATGATAACTGTTATACAATTCTTCTTCTGCCCATTATAAAAAGACACATGCAAAAAAAGCTCAAATTGTACAGTTATATGTTGCCTAACTTGATCCGATTAGCTTCAAGCAAATTACTACATTATGTACACTCAGACGTGAGCAACATCGGGGGCGACTCCAATGCGACATTAGCTGCGTCTCAAATCATATCCTGTCccttatagtgcattactttcaACCACGGCAGTGTACTATATGGAGAACAAGGGGCCATTTGAGACTCAGACATTGTCATGTTTCTGTGCGTTCCTGGTGAAAGTGAAGGCTACGTCTAGCACTGTAACTAACTTGTTGGGAGTCTCCTGCAGTTGGATCGAGTGCAGAACACGCCATGGATTGGGGAGAGCTTTCCGGATCTATGTTCCTCCGGCGAGGGTAACCGTTCAAAGGCTAACAGAAGATGACCACTTCTATCTAGGGGACAAACGGACACGGACAGACAGACTTGACTGCTTTGTGTGCAGGCCTTATGGTAAAGGGAGTGTATGCTGTAGAGTAGGGCCAAGCCGTACACACAGATACTAAATGGCTGGTCTAAAATACATCTGCAGAAGTGAAACATACTGCATTCCTCCCACTATAGCATTCTTCCTAAGATTTTGTCTCAAGGAATTTATTTGTATACTTTAGCCTCCCGCGAGCTCCTGCTTCAATATGCCAAACTAAGACGTGGATGCGCAaatccatacatccatccatACAACAGCATCCATTCACCCCAACCACAACCACCGTTGCATATTCACAAGTACAACCTTCAAACCTCCAATTCAAGCCTTCGTTTATCCAAAACCTTAATTTCACCCCTCCCTGGCTTCCCTCTCATCCCCTCATAGCGTTGGAATGGCACGGCTTCATTTGTCTCACTAATAACTCCTGGATAATGGCACATTCACTATGACAGGCAGCAGCCTATTCACGTGATGATGCTATGTAGTGCTTATGACAGCAGCCTTATGTAAAGTGGGAACATGAAGTGCCTGGGTCTCCTCTCTGTTCACTGCCACCCATGCAGGTGTATATTTGACAGACTTGAGGGACCATCAGGCAGTCATAAAACATGTCTTTCTGAATGCTCTCTGGCCTTCAGCCAGGCTGGACTCTCTCGGGTGGGGCATAGCAAGGAGGCCTTATCGGTATGGGTTGACATGCAGGGTGATGCCCAGAGAGAGTGAGTGCAAATATATATAGGAGGACGTCGTGTGATGTAATAATGACGCCAACCTTGAACAGCGACACCCACATAAACAAGTATGGCTGTGAGCGTATGAGTCTCTTTGAATCTTCAGTGAACGCAAATGGCCTTTGCGGCGATCTGAAGCTTGCGAGCAGGCTCGGTAGGCTACTCgtcaaacaacaaacaaaacaaaacacagggtGAAGAATATAAAGAGAACAAATGTACAAAACAACAGAATGTGTAAAAAAGAAAAGTTTATGTACAACATTTATATGTCGGAGATAATCATGAATCATGAACAGCAACAGctgtgcaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgcgtgcattgaGCTAAGCTTTAGTGAAGAGAGGAGCACTAATCCTACTTTGCGATGGCGAGTGGTAAGGTGGAAACCCTAAATACCGCTTCCTGTTTCTGTGTATGTCACCATCCAAAGGCATTGTCGGTACACAGCAGGACCAGAGGGTCAAAGTTCATACCCACTGATGCCCTGTCACTCTACATCAGGTGGGTTTGGGGTCCAACTCACTGTTATTCAACAGCCCATATATGTCCTACTCCCCCTTTCAGTGCCCTTCCTATCATTTTGCTT
>TU911417
GAAACTTTATTTATAACACAGGGGGCGCTGACGTGGAGTCGCCAACTCAGCATCTATATTACAAGGTTTATCTGCAAGGCTgcgtatgtactgtactgtatttggAAACCAAGATCGCAGTGGCACTAGAAACACACGCTTAAAACAACACACTCTTTCCCTTTTTTTTGTTCAAGTTTTTTTCCTCCCTTTTTTCATACAAAATGGTACAAACAACAATACAAAATAGTTGTGCTGTTGACAGTTTACAAAAAAAAGTATCTTACCTTGATAACTGTGCAATTATTCTTTcgggtttttttttatttttttaagcatTTTAGATTGTTTTCAATTTCATTTTTTTGTTCTCCATTTGAGTTTATGTGAGTATGGTACACACCAGAAGATCTTCTGGACCGCAACCTCGGTCATGCGGGCTGCTACACGCGTTAAAATGATCTTTATGATAACTGTTATACAATTCTTCTTCTGCCCATTATAAAAAGACACATGCAAAAAAAGCTCAAATTGTACAGTTATATGTTGCCTAACTTGATCCGATTAGCTTCAAGCAAATTACTACATTATGTACACTCAGACGTGAGCAACATCGGGGGCGACTCCAATGCGACATTAGCTGCGTCTCAAATCATATCCTGTCccttatagtgcattactttcaACCACGGCAGTGTACTATATGGAGAACAAGGGGCCATTTGAGACTCAGACATTGTCATGTTTCTGTGCGTTCCTGGTGAAAGTGAAGGCTACGTCTAGCACTGTAACTAACTTGTTGGGAGTCTCCTGCAGTTGGATCGAGTGCAGAACACGCCATGGATTGGGGAGAGCTTTCCGGATCTATGTTCCTCCGGCGAGGGTAACCGTTCAAAGGCTAACAGAAGATGACCACTTCTATCTAGGGGACAAACGGACACGGACAGACAGACTTGACTGCTTTGTGTGCAGGCCTTATGGTAAAGGGAGTGTATGCTGTAGAGTAGGGCCAAGCCGTACACACAGATACTAAATGGCTGGTCTAAAATACATCTGCAGAAGTGAAACATACTGCATTCCTCCCACTATAGCATTCTTCCTAAGATTTTGTCTCAAGGAATTTATTTGTATACTTTAGCCTCCCGCGAGCTCCTGCTTCAATATGCCAAACTAAGACGTGGATGCGCAaatccatacatccatccatACAACAGCATCCATTCACCCCAACCACAACCACCGTTGCATATTCACAAGTACAACCTTCAAACCTCCAATTCAAGCCTTCGTTTATCCAAAACCTTAATTTCACCCCTCCCTGGCTTCCCTCTCATCCCCTCATAGCGTTGGAATGGCACGGCTTCATTTGTCTCACTAATAACTCCTGGATAATGGCACATTCACTATGACAGGCAGCAGCCTATTCACGTGATGATGCTATGTAGTGCTTATGACAGCAGCCTTATGTAAAGTGGGAACATGAAGTGCCTGGGTCTCCTCTCTGTTCACTGCCACCCATGCAGGTGTATATTTGACAGACTTGAGGGACCATCAGGCAGTCATAAAACATGTCTTTCTGAATGCTCTCTGGCCTTCAGCCAGGCTGGACTCTCTCGGGTGGGGCATAGCAAGGAGGCCTTATCGGTATGGGTTGACATGCAGGGTGATGCCCAGAGAGAGTGAGTGCAAATATATATAGGAGGACGTCGTGTGATGTAATAATGACGCCAACCTTGAACAGCGACACCCACATAAACAAGTATGGCTGTGAGCGTATGAGTCTCTTTGAATCTTCAGTGAACGCAAATGGCCTTTGCGGCGATCTGAAGCTTGCGAGCAGGCTCGGTAGGCTACTCgtcaaacaacaaacaaaacaaaacacagggtGAAGAATATAAAGAGAACAAATGTACAAAACAACAGAATGTGTAAAAAAGAAAAGTTTATGTACAACATTTATATGTCGGAGATAATCATGAATCATGAACAGCAACAGctgtgcaatgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgcgtgcattgaGCTAAGCTTTAGTGAAGAGAGGAGCACTAATCCTACTTTGCGATGGCGAGTGGTAAGGTGGAAACCCTAAATACCGCTTCCTGTTTCTGTGTATGTCACCATCCAAAGGCATTGTCGGTACACAGCAGGACCAGAGGGTCAAAGTTCATACCCACTGATGCCCTGTCACTCTACATCAGGTGGGTTTGGGGTCCAACTCACTGTTATTCAACAGCCCATATATGTCCTACTCCCCCTTTCAGTGCCCTTCCTATCATTTTGCTTCCTCCCACCTCTCtgcccctacccccccccccccccccccccccctccctccctccattcccctcccctcccctctctgtaaGGCATACTGTACATATCTTTTTTCTCCAGAGGAAGATGTGACGAAGAGATGCTGGATGTAGTGTGTAAAGACCTGATAGAGAAGGGAATGCTGGGAGGAAGTGCATGGGACGCTGagagtcctcctctctcctatcttaTCTAGGAGTTtaaaggctctctctctctctcgctctctgtcaagGAGACTACCTGGAAGGATCCATCATCCTCTTTATTACGAAGGGTAACTGGAGGATGAATTAAATATATAACCCTGCCCAATTTCTATCAAAGCCACCATTAGAGAGAAAGAGCTTAGGGAGAGAGAAGTATCTCTACATATAGAAACCACATTTCTCTCAAGTGTAAATCTCAGCTGAAATTACATTGAACTCAGCTGACATTTTTGAAAGAGCAAAACATTCCGATGGACTCGGTTAAACTGCCGAGAGAAGGAGTGGACGGTGTGAACGGGCAGTGTGAGAGAAGCTGTGTTGATTTCTTCAGCATCTCCTCAACTGGGAACATGGGAACACTATGTGAACGCTCATTTACAAAAGGACTTCtgcctgtgtgtgagtgagaaacAAGTGTATAACTTGTATAACCGGGGgaaatgtactgtatatcataGGAATGTTGGGTAGGGGTGTTTTCACAAAAGACAATAAAATGTATGTTCCTCATAGCACCTTCTTCTCTAAAAAGTGAAATGTTTAGCACTATTAAACCCTGCTTTGGTAAAGTGCAGTTCTTCTCCATCGCTCTTTCCCCCCCAAAAAGTTTGCAACAGACACATTTTCTCCTACATGTTTTCAAAACCTCTTGCATTTCAAATGAATGAAAGTGTCTGAGGAGAGACAGATTGTGGTGCTTGCTAAGTCCCCGACAGAAtctcagctctctctcgctctctctgttgctGCGACGGGGACCAGTATCGGAGATGGTATATCAAAAGTGTGTCAAGACACAACAGTGAATCAGCACACGAAAGTCGAAGCTTGAAACTTTGGGTCTCACAATTTGTCTTCTCTGCCAGCAATGCCAGCAGAAATGGAGCACAAACGGTTTATActaatactttaaaaaatatctACTTTTACACCCCTTTTTCTCATCTTTTTACAGTTTATATAGTTTCCCTCAACACATTGACCAACAAGACCACAAGACAACTAGTGCCAAGTTGACAACATTTGGAAACGGGGGACAGAACCATGCAACCCACCCATATCCTTCACCTAAGAATAGAGACTAGGAAAAGAAAAACAACCCTCCTATGGATGAATATCTTTCACGTTAAAAATGActcgtcatccctctatccctagCTCACACAGCCTCACTAAGTCAAAAGTGCAAAGTAATGCGAACTCAAAACCACAAAGTCACAAAACCATCCAAACTCAACTGCTCTCAGAGGGCACACACTGTTtcgaatacagtaaatacatgttGTCTAACGACACAGTCCCATTCTGTGTCAGTGGGATGATTCCTATTGTCACACAGGCGATGGCTGTGCATTAGAAGCTCAGATGTACCAGATTGTAAAGGAAAGATTTGTCCTTCACCTAAGGAGATATACTGTCTGTCTTTGTACAGAGCACTCCCTCTCCGAAATTCACACCAATGACACCCCCTCACCCCCAAAGGCAAATCCCCTCTGCAACTTATACTGCATCTGCCCGTGTTCCATTGCAGGGTGATGGACATGACACAGGAAAAGGGACGGGAATGTCACAATTGAAAGGTGAGGGGTAATtaggggacaggaggaggacggGGTGCACGTTAGCCCAGAAAATGGCCACCAATCCTGAGTTAGCGGGAGTCAGCAAAAAATATGCACCACTGAAGGCACTTCTTAAACAACAGTGCTTCTGTTCTATGGAATTCAAGTTCAGAGAGATTAAACCAGGGCCTTCCACGCAGAGGAAGGAGTTGACTTTCTGTGTTTCCTTGTTCTTTTCTTCCCCGTCACGCAATATGCACCTCAATCTATCTGCAAAGGGACAAGCTGGGGGGCTGATGGGGGAAATAGAAAGCCAATGGCCTCCAAACACCAGGAAATAGCTTGGATTTAAGGACAGTGAGGACACCATGAGATAATCAAACATTTTTCTAAATAACATAAAACAAAAGTAGCCAACCCCAAAAATCTACCCCCTTCCCCCCCACACACCTTGGAGCAGGAGAGggctcagtacagtacaatacagtacagaagGACAAAGCTGCCTCACTGCACAGTTCACTATGGCGGTTGCTTGATTGATTGGTCAGTTGCTAGGTCAGTTcagttggtttgtgtgtgtgtgtgtggtgtgtattgtcggggtgtggtgtgtattgtcgTGTGTAATGTGTACTGTCGTGTGTGGTGTATAttgttgtgtgtgttagtgtgtgtggtgtgcgttggtgtgtgtgtgtgtgtgcgtgtctccaaggttggagagacagagagagcatggCAGACCAGCGGAGGGGGGTCCAGCTGGGTGTGTGGATCTTTAACGAGGCCCCCCTGTGGCCCTATTCGTCGTCCCCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU911416 False 2291 lncRNA 0.44 2 38050333 38052651
TU911417 True 4910 lncRNA 0.45 2 38050333 38055272

Neighbor

gene id symbol gene type direction distance location
LOC110532011 LOC106571923 coding upstream 17110 38021681 ~ 38033223 (+)
LOC110532009 LOC106571922 coding upstream 70504 37977424 ~ 37979829 (+)
LOC110532007 LOC106571918 coding upstream 101371 37923872 ~ 37948962 (+)
LOC110532006 LOC106571916 coding upstream 144403 37863680 ~ 37905930 (+)
LOC110532004 LOC106571913 coding upstream 320489 37721066 ~ 37729844 (+)
LOC110532014 LOC106571929 coding downstream 812997 38868269 ~ 38884647 (+)
LOC110532013 LOC106571930 coding downstream 831352 38886624 ~ 38909718 (+)
LOC110532019 LOC106571933 coding downstream 1008878 39064150 ~ 39072385 (+)
LOC110531165 LOC106571934 coding downstream 1056083 39111355 ~ 39237408 (+)
LOC110532020 LOC106571937 coding downstream 1184907 39240179 ~ 39256626 (+)
G800789 NA non-coding upstream 60684 37989364 ~ 37989649 (+)
G800776 NA non-coding upstream 77318 37970458 ~ 37973015 (+)
G800727 NA non-coding upstream 129966 37920109 ~ 37920367 (+)
G800705 NA non-coding upstream 142753 37907267 ~ 37907580 (+)
G800589 NA non-coding upstream 221100 37825979 ~ 37829233 (+)
G800834 NA non-coding downstream 14944 38070216 ~ 38071433 (+)
G800996 NA non-coding downstream 279339 38334611 ~ 38337642 (+)
G801490 NA non-coding downstream 474899 38530171 ~ 38530414 (+)
G801496 NA non-coding downstream 479782 38535054 ~ 38535295 (+)
G801511 NA non-coding downstream 489104 38544376 ~ 38545690 (+)
G799858 LOC106571908 other upstream 479922 37567245 ~ 37570411 (+)
G799578 LOC106571900 other upstream 1014415 37034418 ~ 37035918 (+)
G799053 NA other upstream 1733528 36313129 ~ 36316805 (+)
G797932 pphln other upstream 2678185 35364988 ~ 35372148 (+)
G797056 NA other upstream 3493711 34555931 ~ 34556622 (+)
G801778 NA other downstream 732789 38788061 ~ 38788354 (+)
G801851 NA other downstream 877680 38932952 ~ 38933868 (+)

Expression


Co-expression Network