G801496


Basic Information

Item Value
gene id G801496
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 38535054 ~ 38535295 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU912128
gtgcatcagaGCCAAGACCAAGAGACAAAAAACtgcttctattaccaggccatcagactgttgaacagccatccCTAGCCGTCTACCAGGTGACGCACACTCattcaaacaaaacacacacaagctatcacacatacacacacacatgtcatactcacaaacacatggacacactcacacacagccaaTGCTGCTGTCCCATGCTATGGAGACATTGAACCACTGGTCACTTCCCATTTCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU912128 True 242 lncRNA 0.47 1 38535054 38535295

Neighbor

gene id symbol gene type direction distance location
LOC110532011 LOC106571923 coding upstream 501831 38021681 ~ 38033223 (+)
LOC110532009 LOC106571922 coding upstream 555225 37977424 ~ 37979829 (+)
LOC110532007 LOC106571918 coding upstream 586092 37923872 ~ 37948962 (+)
LOC110532006 LOC106571916 coding upstream 629124 37863680 ~ 37905930 (+)
LOC110532004 LOC106571913 coding upstream 805210 37721066 ~ 37729844 (+)
LOC110532014 LOC106571929 coding downstream 332974 38868269 ~ 38884647 (+)
LOC110532013 LOC106571930 coding downstream 351329 38886624 ~ 38909718 (+)
LOC110532019 LOC106571933 coding downstream 528855 39064150 ~ 39072385 (+)
LOC110531165 LOC106571934 coding downstream 576060 39111355 ~ 39237408 (+)
LOC110532020 LOC106571937 coding downstream 704884 39240179 ~ 39256626 (+)
G801490 NA non-coding upstream 4640 38530171 ~ 38530414 (+)
G800996 NA non-coding upstream 197412 38334611 ~ 38337642 (+)
G800834 NA non-coding upstream 463621 38070216 ~ 38071433 (+)
G800826 NA non-coding upstream 479782 38050333 ~ 38055272 (+)
G800789 NA non-coding upstream 545405 37989364 ~ 37989649 (+)
G801511 NA non-coding downstream 9081 38544376 ~ 38545690 (+)
G801513 NA non-coding downstream 11628 38546923 ~ 38547249 (+)
G801525 NA non-coding downstream 20251 38555546 ~ 38555787 (+)
G801633 NA non-coding downstream 100307 38635602 ~ 38635923 (+)
G801636 NA non-coding downstream 101906 38637201 ~ 38637442 (+)
G799858 LOC106571908 other upstream 964643 37567245 ~ 37570411 (+)
G799578 LOC106571900 other upstream 1499136 37034418 ~ 37035918 (+)
G799053 NA other upstream 2218249 36313129 ~ 36316805 (+)
G797932 pphln other upstream 3162906 35364988 ~ 35372148 (+)
G801778 NA other downstream 252766 38788061 ~ 38788354 (+)
G801851 NA other downstream 397657 38932952 ~ 38933868 (+)
G802324 LOC106571945 other downstream 880580 39415875 ~ 39417460 (+)

Expression


Co-expression Network