G801513


Basic Information

Item Value
gene id G801513
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 38546923 ~ 38547249 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU912145
GCCATTGTCTGTGGTTCTCACAATCTTAATCCGGATTTCAAACTCCAAATGGGTGTCATTTAGGGCACCTGCTAACACATCAAAGGTGTGCGATCTTCTCAACCGTTTACAGGCCAGGGCTGCTGAGCATTTGTTGAGACTGTTGGTGTTACAGTGGGCTGCAACACCAATGAAGCTCCGTCTTCTTGCAGACCAGCAGTCGGTGGTGGTGGCGATGTGGTCAACTCCTCTCATGGAGTCACCTTCTTCATTTCCTTGGAGGCTTCATCAATCCTGGAGCGCAGTGTGGGCCTTGATAAGATCTTCTTCAGATGGTGTACATGCTTT

Function

NR:

description
uncharacterized protein LOC109972796 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU912145 True 327 lncRNA 0.49 1 38546923 38547249

Neighbor

gene id symbol gene type direction distance location
LOC110532011 LOC106571923 coding upstream 513700 38021681 ~ 38033223 (+)
LOC110532009 LOC106571922 coding upstream 567094 37977424 ~ 37979829 (+)
LOC110532007 LOC106571918 coding upstream 597961 37923872 ~ 37948962 (+)
LOC110532006 LOC106571916 coding upstream 640993 37863680 ~ 37905930 (+)
LOC110532004 LOC106571913 coding upstream 817079 37721066 ~ 37729844 (+)
LOC110532014 LOC106571929 coding downstream 321020 38868269 ~ 38884647 (+)
LOC110532013 LOC106571930 coding downstream 339375 38886624 ~ 38909718 (+)
LOC110532019 LOC106571933 coding downstream 516901 39064150 ~ 39072385 (+)
LOC110531165 LOC106571934 coding downstream 564106 39111355 ~ 39237408 (+)
LOC110532020 LOC106571937 coding downstream 692930 39240179 ~ 39256626 (+)
G801511 NA non-coding upstream 1233 38544376 ~ 38545690 (+)
G801496 NA non-coding upstream 11628 38535054 ~ 38535295 (+)
G801490 NA non-coding upstream 16509 38530171 ~ 38530414 (+)
G800996 NA non-coding upstream 209281 38334611 ~ 38337642 (+)
G800834 NA non-coding upstream 475490 38070216 ~ 38071433 (+)
G801525 NA non-coding downstream 8297 38555546 ~ 38555787 (+)
G801633 NA non-coding downstream 88353 38635602 ~ 38635923 (+)
G801636 NA non-coding downstream 89952 38637201 ~ 38637442 (+)
G801641 NA non-coding downstream 91892 38639141 ~ 38639446 (+)
G801646 NA non-coding downstream 96696 38643945 ~ 38644157 (+)
G799858 LOC106571908 other upstream 976512 37567245 ~ 37570411 (+)
G799578 LOC106571900 other upstream 1511005 37034418 ~ 37035918 (+)
G799053 NA other upstream 2230118 36313129 ~ 36316805 (+)
G797932 pphln other upstream 3174775 35364988 ~ 35372148 (+)
G801778 NA other downstream 240812 38788061 ~ 38788354 (+)
G801851 NA other downstream 385703 38932952 ~ 38933868 (+)
G802324 LOC106571945 other downstream 868626 39415875 ~ 39417460 (+)

Expression


Co-expression Network