G801851


Basic Information

Item Value
gene id G801851
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 38932952 ~ 38933868 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU912489
gaggtaaaggatgagattctctcccgggaggttccttccagcgtggattccttgattgaactcgctattcgcattgagcgacgggttgatcttcgtcaccgagctcgtggaaaggagcttgcgctctccgtcgcccccctctccgcatcactaccatcttcctctgccggctcgggtgctgagcccatgcagctgggaggtatccgcatctcgactaaggagagggaacggagaatcaccaaccgcctctgtctctattgcggttccgctggtcattttgtcacttcatgtccagtaaaaggccagagctcgtcagtaagcggagggctactggtgagcgctactactcctgtctctccttcaagatcctgcactaccttgtcggtccatctacgctggaccggttcgtcagcttcctgcagtgccttaatagactctggggcggagggctgttttatggacgagacctgggctcgggaacatgacattcctctcagacagttaaaggagcccacggccttgttcgccctggatggtagtcctctccccaggattcagcgtgagacgctacctttaaccctcactgtttctggtaatcatagcgaaaccatttcttttttaatttttcgttcaccttttacacctgttgttttgggccatccctggctagtttgtcataatccttccattaattggtctagtaattctatcctctcctggaacgtctcttgtcatgtgaaatgtttaatgtctgctatccctcctgtttcctctgtctcttcttcacaggaggagcctggtgatttgacaggggtgccggaggaatatcacgatctgcgcacggtgttcagtcggtccagggccacctctcttcctccacaccggtcgtatgattgtagtattgatctccttccggg

Function

NR:

description
Pol polyprotein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU912489 True 917 TUCP 0.52 1 38932952 38933868

Neighbor

gene id symbol gene type direction distance location
LOC110532013 LOC106571930 coding upstream 23234 38886624 ~ 38909718 (+)
LOC110532014 LOC106571929 coding upstream 48305 38868269 ~ 38884647 (+)
LOC110532011 LOC106571923 coding upstream 899729 38021681 ~ 38033223 (+)
LOC110532009 LOC106571922 coding upstream 953123 37977424 ~ 37979829 (+)
LOC110532007 LOC106571918 coding upstream 983990 37923872 ~ 37948962 (+)
LOC110532019 LOC106571933 coding downstream 130282 39064150 ~ 39072385 (+)
LOC110531165 LOC106571934 coding downstream 177487 39111355 ~ 39237408 (+)
LOC110532020 LOC106571937 coding downstream 306311 39240179 ~ 39256626 (+)
LOC110532026 LOC106571943 coding downstream 441500 39375368 ~ 39383225 (+)
ddx23 LOC106571944 coding downstream 467167 39401035 ~ 39411199 (+)
G801850 NA non-coding upstream 1731 38930887 ~ 38931221 (+)
G801849 NA non-coding upstream 3061 38929543 ~ 38929891 (+)
G801824 NA non-coding upstream 74006 38858722 ~ 38858946 (+)
G801822 NA non-coding upstream 75505 38857048 ~ 38857447 (+)
G801789 LOC100194703 non-coding upstream 131862 38800876 ~ 38801090 (+)
G801854 NA non-coding downstream 21965 38955833 ~ 38956104 (+)
G801903 NA non-coding downstream 87708 39021576 ~ 39021831 (+)
G801905 NA non-coding downstream 90032 39023900 ~ 39024254 (+)
G801907 NA non-coding downstream 92047 39025915 ~ 39026386 (+)
G801913 NA non-coding downstream 101541 39035409 ~ 39035715 (+)
G801778 NA other upstream 144598 38788061 ~ 38788354 (+)
G800834 NA other upstream 861519 38070216 ~ 38071433 (+)
G799858 LOC106571908 other upstream 1362541 37567245 ~ 37570411 (+)
G799578 LOC106571900 other upstream 1897034 37034418 ~ 37035918 (+)
G799053 NA other upstream 2616147 36313129 ~ 36316805 (+)
G802324 LOC106571945 other downstream 482007 39415875 ~ 39417460 (+)
adcy6a LOC106566714 other downstream 532105 39465931 ~ 39513879 (+)
spryd4 LOC106571951 other downstream 705386 39639241 ~ 39640889 (+)

Expression


Co-expression Network