G801907


Basic Information

Item Value
gene id G801907
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 39025915 ~ 39026386 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU912558
gtctctccagtgagccatgtttcagtgaagcaaaggacgttacagtctctgatgtccctctggaatgctacccttgctcggatttcatcaaccttgttgtcaagagactggacattggcaagaagaatgctagggagtggtgcacggtgtgcccgtctccggagtctgaccagaagaccgcctcgtttccctctctttcggagtcgtttttttgggtcgctgcataggatccactccgttgtcctgtttgtaaggcagaacacagggtccgcgtcgcgaaaaacatattcttggtcgtactgatggtgagttgacgctgatcttatattcagtagttcttctcgactgtatgtaatgaaacctaagatgacctggggtactaatgtaagaaataacacgtaaaaaaacaaaaaactgcatagtttcctaggaacgcgaagcgaggcagccatctctgtcggcgccggaagta

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU912558 True 472 lncRNA 0.48 1 39025915 39026386

Neighbor

gene id symbol gene type direction distance location
LOC110532013 LOC106571930 coding upstream 116197 38886624 ~ 38909718 (+)
LOC110532014 LOC106571929 coding upstream 141268 38868269 ~ 38884647 (+)
LOC110532011 LOC106571923 coding upstream 992692 38021681 ~ 38033223 (+)
LOC110532009 LOC106571922 coding upstream 1046086 37977424 ~ 37979829 (+)
LOC110532007 LOC106571918 coding upstream 1076953 37923872 ~ 37948962 (+)
LOC110532019 LOC106571933 coding downstream 37764 39064150 ~ 39072385 (+)
LOC110531165 LOC106571934 coding downstream 84969 39111355 ~ 39237408 (+)
LOC110532020 LOC106571937 coding downstream 213793 39240179 ~ 39256626 (+)
LOC110532026 LOC106571943 coding downstream 348982 39375368 ~ 39383225 (+)
ddx23 LOC106571944 coding downstream 374649 39401035 ~ 39411199 (+)
G801905 NA non-coding upstream 1661 39023900 ~ 39024254 (+)
G801903 NA non-coding upstream 4084 39021576 ~ 39021831 (+)
G801854 NA non-coding upstream 69811 38955833 ~ 38956104 (+)
G801850 NA non-coding upstream 94694 38930887 ~ 38931221 (+)
G801849 NA non-coding upstream 96024 38929543 ~ 38929891 (+)
G801913 NA non-coding downstream 9023 39035409 ~ 39035715 (+)
G801915 NA non-coding downstream 10601 39036987 ~ 39037243 (+)
G801920 NA non-coding downstream 18512 39044898 ~ 39045148 (+)
G801924 NA non-coding downstream 47289 39073675 ~ 39074102 (+)
G801927 LOC106581475 non-coding downstream 48085 39074471 ~ 39074715 (+)
G801851 NA other upstream 92047 38932952 ~ 38933868 (+)
G801778 NA other upstream 237561 38788061 ~ 38788354 (+)
G800834 NA other upstream 954482 38070216 ~ 38071433 (+)
G799858 LOC106571908 other upstream 1455504 37567245 ~ 37570411 (+)
G799578 LOC106571900 other upstream 1989997 37034418 ~ 37035918 (+)
G802324 LOC106571945 other downstream 389489 39415875 ~ 39417460 (+)
adcy6a LOC106566714 other downstream 439587 39465931 ~ 39513879 (+)
spryd4 LOC106571951 other downstream 612868 39639241 ~ 39640889 (+)

Expression


Co-expression Network