G802325


Basic Information

Item Value
gene id G802325
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 39414725 ~ 39415718 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU913028
actttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccatgtccctgctgaagaaatgcaggaccaaaccatgatgctgccaccaccatgtttgacagtggggatggtgtgttaagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagttcaattttggtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaacaacactttt
>TU913026
tcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatatttttgtatccaaatccggctttaaacttcttcacaacagtatcttggacctgcctggtgtgttccttgttcttcatgaagctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacagagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataatt
>TU913030
tcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatatttttgtatccaaatccggctttaaacttcttcacaacagtatcttggacctgcctggtgtgttccttgttcttcatgaagctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacagagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU913028 False 425 lncRNA 0.42 1 39414725 39415149
TU913026 False 320 lncRNA 0.41 1 39415399 39415718
TU913030 True 249 lncRNA 0.40 1 39415399 39415647

Neighbor

gene id symbol gene type direction distance location
ddx23 LOC106571944 coding upstream 3526 39401035 ~ 39411199 (+)
LOC110532026 LOC106571943 coding upstream 31500 39375368 ~ 39383225 (+)
LOC110532020 LOC106571937 coding upstream 158099 39240179 ~ 39256626 (+)
LOC110531165 LOC106571934 coding upstream 177317 39111355 ~ 39237408 (+)
LOC110532019 LOC106571933 coding upstream 342340 39064150 ~ 39072385 (+)
adcy6a LOC106566714 coding downstream 50213 39465931 ~ 39513879 (+)
LOC110532032 NA coding downstream 85535 39501253 ~ 39503641 (+)
g6pd LOC106571947 coding downstream 115741 39531459 ~ 39542666 (+)
spryd4 LOC106571951 coding downstream 223523 39639241 ~ 39640889 (+)
LOC110532038 LOC100286410 coding downstream 270110 39685828 ~ 39715886 (+)
G802317 NA non-coding upstream 16632 39397878 ~ 39398093 (+)
G802313 NA non-coding upstream 24186 39390298 ~ 39390539 (+)
G802191 NA non-coding upstream 29829 39326030 ~ 39384896 (+)
G802195 LOC107737655 non-coding upstream 75531 39337906 ~ 39339194 (+)
G802292 NA non-coding upstream 91888 39322616 ~ 39322837 (+)
G802328 NA non-coding downstream 20648 39436366 ~ 39516038 (+)
G802353 NA non-coding downstream 31365 39447083 ~ 39469432 (+)
G802392 LOC106571950 non-coding downstream 138469 39554187 ~ 39556665 (+)
G802399 NA non-coding downstream 142547 39558265 ~ 39562731 (+)
G801851 NA other upstream 480857 38932952 ~ 38933868 (+)
G801778 NA other upstream 626371 38788061 ~ 38788354 (+)
G800834 NA other upstream 1343292 38070216 ~ 38071433 (+)
G802324 LOC106571945 other downstream 157 39415875 ~ 39417460 (+)
G802821 NA other downstream 373939 39789657 ~ 39790402 (+)
G802822 NA other downstream 376199 39791917 ~ 39792333 (+)

Expression


Co-expression Network