G819287


Basic Information

Item Value
gene id G819287
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 54107376 ~ 54107684 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU931710
actatatacacaaaagtatgtggacaccccttcaaattagtggatttggctctttcagccacactcgttactgacgtgtataaaatcaagcacacagccatgcaatctccatagacaaacattagcagtagaatggccttactgaagagctcaatgactttcaacgtagcaccgtcatagaatgccacctttccaacaagttagttcgtcaaatttctgccctgctagagctgacccagtcaactgtaagtgctgttattgtaaagtggaaacgtctaggagcaacaacggctcagccgtgaagtggta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU931710 True 309 lncRNA 0.44 1 54107376 54107684

Neighbor

gene id symbol gene type direction distance location
LOC110532391 LOC106571996 coding upstream 433878 53596083 ~ 53676213 (+)
LOC110532390 gbrd coding upstream 681683 53404905 ~ 53425693 (+)
LOC110532385 LOC106572000 coding upstream 892614 53202981 ~ 53214762 (+)
LOC110532383 LOC106572002 coding upstream 953248 53128438 ~ 53154128 (+)
LOC110532379 LOC106572005 coding upstream 985512 53043077 ~ 53121864 (+)
LOC118966073 NA coding downstream 124065 54231749 ~ 54233447 (+)
LOC110532392 dffb coding downstream 127112 54234796 ~ 54239506 (+)
LOC110532396 LOC106571991 coding downstream 137639 54245323 ~ 54249584 (+)
LOC110532395 LOC106571990 coding downstream 187338 54295022 ~ 54306173 (+)
twist3 LOC106572367 coding downstream 819044 54926728 ~ 54934570 (+)
G819270 NA non-coding upstream 14172 54092983 ~ 54093204 (+)
G818944 NA non-coding upstream 235349 53870817 ~ 53872027 (+)
G818740 NA non-coding upstream 402542 53704630 ~ 53704834 (+)
G818737 NA non-coding upstream 403782 53703384 ~ 53703594 (+)
G818733 NA non-coding upstream 405883 53701044 ~ 53701493 (+)
G819292 NA non-coding downstream 4861 54112545 ~ 54112750 (+)
G819295 NA non-coding downstream 7287 54114971 ~ 54115547 (+)
G819308 NA non-coding downstream 15992 54123676 ~ 54123926 (+)
G819327 NA non-coding downstream 29090 54136774 ~ 54136994 (+)
G819338 NA non-coding downstream 41419 54149103 ~ 54187401 (+)
LOC110532368 LOC106572016 other upstream 1379856 52692676 ~ 52734929 (+)
LOC110532349 LOC106591969 other upstream 1781736 52323001 ~ 52325924 (+)
G815767 casz1 other upstream 2760882 51345372 ~ 51346494 (+)
G815610 NA other upstream 3028434 51078447 ~ 51078942 (+)
G815428 NA other upstream 3306995 50796214 ~ 50800381 (+)
G819897 NA other downstream 619187 54726871 ~ 54727376 (+)
G820665 NA other downstream 1125574 55233258 ~ 55233798 (+)
dlgap4a dlgap4 other downstream 1423353 55531033 ~ 55647541 (+)
G820944 NA other downstream 1589956 55697640 ~ 55697978 (+)
G821363 uhrf1bp1 other downstream 1866358 55974042 ~ 55975316 (+)

Expression


Co-expression Network