Gene
RNA
| Item | Value |
|---|---|
| gene id | G822220 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 56528736 ~ 56537038 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU934867 | True | 258 | lncRNA | 0.45 | 2 | 56528736 | 56537038 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531212 | LOC106567287 | coding | upstream | 65189 | 56246710 ~ 56463547 (+) |
| LOC110532427 | LOC106572343 | coding | upstream | 398323 | 56125754 ~ 56132936 (+) |
| LOC110532426 | NA | coding | upstream | 404523 | 56119005 ~ 56124213 (+) |
| LOC110532428 | NA | coding | upstream | 416692 | 56103492 ~ 56112044 (+) |
| LOC110532424 | spdef | coding | upstream | 476748 | 56042832 ~ 56051988 (+) |
| LOC110532433 | LOC106572420 | coding | downstream | 53653 | 56590691 ~ 56641983 (+) |
| LOC110532435 | LOC106572422 | coding | downstream | 108742 | 56645780 ~ 56652084 (+) |
| LOC110532437 | LOC106572423 | coding | downstream | 124719 | 56661757 ~ 56708327 (+) |
| LOC110532442 | eif4e3 | coding | downstream | 293706 | 56830744 ~ 56839626 (+) |
| LOC110532441 | LOC106572418 | coding | downstream | 302679 | 56839717 ~ 56863877 (+) |
| G822187 | NA | non-coding | upstream | 21120 | 56507410 ~ 56507616 (+) |
| G822183 | NA | non-coding | upstream | 23389 | 56505113 ~ 56505347 (+) |
| G822181 | NA | non-coding | upstream | 24261 | 56504214 ~ 56504475 (+) |
| G821520 | NA | non-coding | upstream | 297327 | 56225511 ~ 56231409 (+) |
| G821477 | NA | non-coding | upstream | 364981 | 56163421 ~ 56163755 (+) |
| G822268 | NA | non-coding | downstream | 25624 | 56562662 ~ 56562889 (+) |
| G822269 | NA | non-coding | downstream | 26075 | 56563113 ~ 56563316 (+) |
| G822270 | NA | non-coding | downstream | 26406 | 56563444 ~ 56563665 (+) |
| G822274 | NA | non-coding | downstream | 28559 | 56565597 ~ 56565827 (+) |
| G822291 | NA | non-coding | downstream | 41405 | 56578443 ~ 56578656 (+) |
| G821409 | pacsin1 | other | upstream | 465081 | 56061706 ~ 56063655 (+) |
| G821363 | uhrf1bp1 | other | upstream | 553420 | 55974042 ~ 55975316 (+) |
| G820944 | NA | other | upstream | 830758 | 55697640 ~ 55697978 (+) |
| G822283 | NA | other | downstream | 35569 | 56572607 ~ 56572957 (+) |
| G822404 | NA | other | downstream | 225587 | 56762625 ~ 56763540 (+) |
| LOC110532462 | LOC106572392 | other | downstream | 805363 | 57342345 ~ 57958962 (+) |
| G823373 | NA | other | downstream | 1491581 | 58028619 ~ 58028857 (+) |
| G823467 | NA | other | downstream | 1668225 | 58205263 ~ 58244984 (+) |
