G822268


Basic Information

Item Value
gene id G822268
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 56562662 ~ 56562889 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU934917
caccagtgtaatgatcaaagatatgatcaagagcctcacatacagtatatcgtttAGTCATAGtgctaccaaatcaaatcaaatgtatttatatagcccttcgtacattagctgatatctcaaagtgctgtacagaaacccagcctaaaaccccaaacagcaagcaatgcaggtgtagaagcacggaatgaattgtgagcaaggcctcaaaaaagcttaaTATACACC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU934917 True 228 lncRNA 0.39 1 56562662 56562889

Neighbor

gene id symbol gene type direction distance location
LOC110531212 LOC106567287 coding upstream 99115 56246710 ~ 56463547 (+)
LOC110532427 LOC106572343 coding upstream 432249 56125754 ~ 56132936 (+)
LOC110532426 NA coding upstream 438449 56119005 ~ 56124213 (+)
LOC110532428 NA coding upstream 450618 56103492 ~ 56112044 (+)
LOC110532424 spdef coding upstream 510674 56042832 ~ 56051988 (+)
LOC110532433 LOC106572420 coding downstream 27802 56590691 ~ 56641983 (+)
LOC110532435 LOC106572422 coding downstream 82891 56645780 ~ 56652084 (+)
LOC110532437 LOC106572423 coding downstream 98868 56661757 ~ 56708327 (+)
LOC110532442 eif4e3 coding downstream 267855 56830744 ~ 56839626 (+)
LOC110532441 LOC106572418 coding downstream 276828 56839717 ~ 56863877 (+)
G822220 NA non-coding upstream 25624 56528736 ~ 56537038 (+)
G822187 NA non-coding upstream 55046 56507410 ~ 56507616 (+)
G822183 NA non-coding upstream 57315 56505113 ~ 56505347 (+)
G822181 NA non-coding upstream 58187 56504214 ~ 56504475 (+)
G821520 NA non-coding upstream 331253 56225511 ~ 56231409 (+)
G822269 NA non-coding downstream 224 56563113 ~ 56563316 (+)
G822270 NA non-coding downstream 555 56563444 ~ 56563665 (+)
G822274 NA non-coding downstream 2708 56565597 ~ 56565827 (+)
G822291 NA non-coding downstream 15554 56578443 ~ 56578656 (+)
G821409 pacsin1 other upstream 499007 56061706 ~ 56063655 (+)
G821363 uhrf1bp1 other upstream 587346 55974042 ~ 55975316 (+)
G820944 NA other upstream 864684 55697640 ~ 55697978 (+)
G822283 NA other downstream 9718 56572607 ~ 56572957 (+)
G822404 NA other downstream 199736 56762625 ~ 56763540 (+)
LOC110532462 LOC106572392 other downstream 779512 57342345 ~ 57958962 (+)
G823373 NA other downstream 1465730 58028619 ~ 58028857 (+)
G823467 NA other downstream 1642374 58205263 ~ 58244984 (+)

Expression


Co-expression Network