G822270


Basic Information

Item Value
gene id G822270
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 56563444 ~ 56563665 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU934919
CTTTTATTTagtgatcaatttattaaagtggtcagTGATATGAGTCTCTATGTAGGAAGTAGCCTCTCttagttagtgattgctgtttagcagtctgatggccttgagatagaagctgtttttcagtctctcggccccagctttgatgcacctgtactgatctcgccttctgggtggtagaggggtgaacaggcagtggctcgggtggttgttgtccttgat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU934919 True 222 lncRNA 0.45 1 56563444 56563665

Neighbor

gene id symbol gene type direction distance location
LOC110531212 LOC106567287 coding upstream 99897 56246710 ~ 56463547 (+)
LOC110532427 LOC106572343 coding upstream 433031 56125754 ~ 56132936 (+)
LOC110532426 NA coding upstream 439231 56119005 ~ 56124213 (+)
LOC110532428 NA coding upstream 451400 56103492 ~ 56112044 (+)
LOC110532424 spdef coding upstream 511456 56042832 ~ 56051988 (+)
LOC110532433 LOC106572420 coding downstream 27026 56590691 ~ 56641983 (+)
LOC110532435 LOC106572422 coding downstream 82115 56645780 ~ 56652084 (+)
LOC110532437 LOC106572423 coding downstream 98092 56661757 ~ 56708327 (+)
LOC110532442 eif4e3 coding downstream 267079 56830744 ~ 56839626 (+)
LOC110532441 LOC106572418 coding downstream 276052 56839717 ~ 56863877 (+)
G822269 NA non-coding upstream 128 56563113 ~ 56563316 (+)
G822268 NA non-coding upstream 555 56562662 ~ 56562889 (+)
G822220 NA non-coding upstream 26406 56528736 ~ 56537038 (+)
G822187 NA non-coding upstream 55828 56507410 ~ 56507616 (+)
G822183 NA non-coding upstream 58097 56505113 ~ 56505347 (+)
G822274 NA non-coding downstream 1932 56565597 ~ 56565827 (+)
G822291 NA non-coding downstream 14778 56578443 ~ 56578656 (+)
G822354 NA non-coding downstream 88862 56652527 ~ 56654815 (+)
G822360 NA non-coding downstream 144898 56708563 ~ 56714483 (+)
G821409 pacsin1 other upstream 499789 56061706 ~ 56063655 (+)
G821363 uhrf1bp1 other upstream 588128 55974042 ~ 55975316 (+)
G820944 NA other upstream 865466 55697640 ~ 55697978 (+)
G822283 NA other downstream 8942 56572607 ~ 56572957 (+)
G822404 NA other downstream 198960 56762625 ~ 56763540 (+)
LOC110532462 LOC106572392 other downstream 778736 57342345 ~ 57958962 (+)
G823373 NA other downstream 1464954 58028619 ~ 58028857 (+)
G823467 NA other downstream 1641598 58205263 ~ 58244984 (+)

Expression


Co-expression Network